Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scarb1Q61009 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scarb1Q61009 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scarb1Q61009 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scarb1Q61009 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scarb1Q61009 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scarb1Q61009 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scarb1Q61009 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scarb1Q61009 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Scarb1Q61009 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scarb1Q61009 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scarb1Q61009 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Scarb1Q61009 Mir6538-201ENSMUST00000183713 110 ntBASIC16.48■□□□□ 0.23
Scarb1Q61009 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.48■□□□□ 0.23
Scarb1Q61009 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Scarb1Q61009 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scarb1Q61009 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scarb1Q61009 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scarb1Q61009 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scarb1Q61009 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scarb1Q61009 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scarb1Q61009 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scarb1Q61009 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.46■□□□□ 0.23
Scarb1Q61009 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scarb1Q61009 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scarb1Q61009 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Scarb1Q61009 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Scarb1Q61009 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.46■□□□□ 0.23
Scarb1Q61009 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scarb1Q61009 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scarb1Q61009 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scarb1Q61009 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scarb1Q61009 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scarb1Q61009 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scarb1Q61009 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scarb1Q61009 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.46■□□□□ 0.22
Scarb1Q61009 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
Scarb1Q61009 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scarb1Q61009 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scarb1Q61009 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Scarb1Q61009 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scarb1Q61009 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scarb1Q61009 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scarb1Q61009 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scarb1Q61009 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scarb1Q61009 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Scarb1Q61009 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scarb1Q61009 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scarb1Q61009 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Scarb1Q61009 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.44■□□□□ 0.22
Scarb1Q61009 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.44■□□□□ 0.22
Scarb1Q61009 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.44■□□□□ 0.22
Scarb1Q61009 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scarb1Q61009 Rarb-207ENSMUST00000225921 2756 ntBASIC16.43■□□□□ 0.22
Scarb1Q61009 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Scarb1Q61009 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.43■□□□□ 0.22
Scarb1Q61009 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Scarb1Q61009 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.43■□□□□ 0.22
Scarb1Q61009 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.43■□□□□ 0.22
Scarb1Q61009 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scarb1Q61009 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scarb1Q61009 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms