Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r223Q5SSA0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r223Q5SSA0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r223Q5SSA0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r223Q5SSA0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vmn1r223Q5SSA0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vmn1r223Q5SSA0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vmn1r223Q5SSA0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vmn1r223Q5SSA0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vmn1r223Q5SSA0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vmn1r223Q5SSA0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.08■□□□□ 0.32
Vmn1r223Q5SSA0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.08■□□□□ 0.32
Vmn1r223Q5SSA0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Vmn1r223Q5SSA0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vmn1r223Q5SSA0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vmn1r223Q5SSA0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vmn1r223Q5SSA0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r223Q5SSA0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r223Q5SSA0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r223Q5SSA0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r223Q5SSA0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r223Q5SSA0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r223Q5SSA0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r223Q5SSA0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r223Q5SSA0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.06■□□□□ 0.32
Vmn1r223Q5SSA0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vmn1r223Q5SSA0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Vmn1r223Q5SSA0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r223Q5SSA0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r223Q5SSA0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r223Q5SSA0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r223Q5SSA0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r223Q5SSA0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r223Q5SSA0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r223Q5SSA0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r223Q5SSA0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r223Q5SSA0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vmn1r223Q5SSA0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vmn1r223Q5SSA0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Gm22238-201ENSMUST00000175222 88 ntBASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.03■□□□□ 0.32
Vmn1r223Q5SSA0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vmn1r223Q5SSA0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Vmn1r223Q5SSA0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Vmn1r223Q5SSA0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vmn1r223Q5SSA0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.02■□□□□ 0.32
Vmn1r223Q5SSA0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vmn1r223Q5SSA0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms