Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav7d-4Q5R1H9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trav7d-4Q5R1H9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav7d-4Q5R1H9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav7d-4Q5R1H9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav7d-4Q5R1H9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav7d-4Q5R1H9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav7d-4Q5R1H9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trav7d-4Q5R1H9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav7d-4Q5R1H9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav7d-4Q5R1H9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav7d-4Q5R1H9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.92□□□□□ -0.02
Trav7d-4Q5R1H9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms