Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15-1-dv6-1Q5R1D2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm12366-201ENSMUST00000121722 873 ntBASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm5786-201ENSMUST00000085368 882 ntBASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm10399-202ENSMUST00000202768 748 ntBASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm7143-201ENSMUST00000222811 859 ntBASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms