Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav8d-2Q5R1B6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Trav8d-2Q5R1B6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8d-2Q5R1B6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8d-2Q5R1B6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8d-2Q5R1B6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8d-2Q5R1B6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8d-2Q5R1B6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.27■□□□□ 0.68
Trav8d-2Q5R1B6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.27■□□□□ 0.68
Trav8d-2Q5R1B6 Gm37856-201ENSMUST00000191634 999 ntBASIC19.27■□□□□ 0.68
Trav8d-2Q5R1B6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8d-2Q5R1B6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trav8d-2Q5R1B6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trav8d-2Q5R1B6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav8d-2Q5R1B6 Gm13534-201ENSMUST00000121169 513 ntBASIC19.26■□□□□ 0.67
Trav8d-2Q5R1B6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav8d-2Q5R1B6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav8d-2Q5R1B6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav8d-2Q5R1B6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8d-2Q5R1B6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8d-2Q5R1B6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.25■□□□□ 0.67
Trav8d-2Q5R1B6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.25■□□□□ 0.67
Trav8d-2Q5R1B6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trav8d-2Q5R1B6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.25■□□□□ 0.67
Trav8d-2Q5R1B6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8d-2Q5R1B6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8d-2Q5R1B6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 Trmt13-210ENSMUST00000198454 880 ntBASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8d-2Q5R1B6 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.23■□□□□ 0.67
Trav8d-2Q5R1B6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8d-2Q5R1B6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav8d-2Q5R1B6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav8d-2Q5R1B6 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.23■□□□□ 0.67
Trav8d-2Q5R1B6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trav8d-2Q5R1B6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8d-2Q5R1B6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8d-2Q5R1B6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8d-2Q5R1B6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8d-2Q5R1B6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trav8d-2Q5R1B6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms