Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trdv2-2Q5R1A4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trdv2-2Q5R1A4 Gm16464-201ENSMUST00000117815 1095 ntBASIC15□□□□□ -0.01
Trdv2-2Q5R1A4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trdv2-2Q5R1A4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trdv2-2Q5R1A4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trdv2-2Q5R1A4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trdv2-2Q5R1A4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trdv2-2Q5R1A4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-2Q5R1A4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Gm45444-201ENSMUST00000211394 898 ntBASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trdv2-2Q5R1A4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-2Q5R1A4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-2Q5R1A4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trdv2-2Q5R1A4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trdv2-2Q5R1A4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trdv2-2Q5R1A4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-2Q5R1A4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-2Q5R1A4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-2Q5R1A4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-2Q5R1A4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.94□□□□□ -0.02
Trdv2-2Q5R1A4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-2Q5R1A4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.94□□□□□ -0.02
Trdv2-2Q5R1A4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.94□□□□□ -0.02
Trdv2-2Q5R1A4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-2Q5R1A4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-2Q5R1A4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms