Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Urb1Q571H0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Urb1Q571H0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Urb1Q571H0 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.06■□□□□ 0.48
Urb1Q571H0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Urb1Q571H0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Urb1Q571H0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Urb1Q571H0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Urb1Q571H0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Urb1Q571H0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Urb1Q571H0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Urb1Q571H0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Urb1Q571H0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Urb1Q571H0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Urb1Q571H0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Urb1Q571H0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Urb1Q571H0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Urb1Q571H0 Gm20760-201ENSMUST00000179197 648 ntBASIC18.05■□□□□ 0.48
Urb1Q571H0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Urb1Q571H0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Urb1Q571H0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Urb1Q571H0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Urb1Q571H0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Urb1Q571H0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Urb1Q571H0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Urb1Q571H0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Urb1Q571H0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Urb1Q571H0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Urb1Q571H0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Urb1Q571H0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Urb1Q571H0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.04■□□□□ 0.48
Urb1Q571H0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Urb1Q571H0 Gm6365-201ENSMUST00000054711 744 ntBASIC18.04■□□□□ 0.48
Urb1Q571H0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Urb1Q571H0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Urb1Q571H0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Urb1Q571H0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.03■□□□□ 0.48
Urb1Q571H0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Urb1Q571H0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Urb1Q571H0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Urb1Q571H0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Urb1Q571H0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.03■□□□□ 0.48
Urb1Q571H0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Urb1Q571H0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Urb1Q571H0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.03■□□□□ 0.48
Urb1Q571H0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Urb1Q571H0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Urb1Q571H0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.02■□□□□ 0.48
Urb1Q571H0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Urb1Q571H0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Urb1Q571H0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Urb1Q571H0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Urb1Q571H0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Urb1Q571H0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Urb1Q571H0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Urb1Q571H0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Urb1Q571H0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Urb1Q571H0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Urb1Q571H0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Urb1Q571H0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Urb1Q571H0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.01■□□□□ 0.47
Urb1Q571H0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Urb1Q571H0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.01■□□□□ 0.47
Urb1Q571H0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Urb1Q571H0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Urb1Q571H0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Urb1Q571H0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Urb1Q571H0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.01■□□□□ 0.47
Urb1Q571H0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Urb1Q571H0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Urb1Q571H0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Urb1Q571H0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Urb1Q571H0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Urb1Q571H0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18■□□□□ 0.47
Urb1Q571H0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Urb1Q571H0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Urb1Q571H0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Urb1Q571H0 Gm13168-201ENSMUST00000121771 632 ntBASIC18■□□□□ 0.47
Urb1Q571H0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18■□□□□ 0.47
Urb1Q571H0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Urb1Q571H0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18■□□□□ 0.47
Urb1Q571H0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.99■□□□□ 0.47
Urb1Q571H0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Urb1Q571H0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.99■□□□□ 0.47
Urb1Q571H0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Urb1Q571H0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Urb1Q571H0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Urb1Q571H0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Urb1Q571H0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Urb1Q571H0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Urb1Q571H0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Urb1Q571H0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Urb1Q571H0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Urb1Q571H0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Urb1Q571H0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.98■□□□□ 0.47
Urb1Q571H0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Urb1Q571H0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Urb1Q571H0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Urb1Q571H0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Urb1Q571H0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms