Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp30Q3UN04 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp30Q3UN04 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp30Q3UN04 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp30Q3UN04 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp30Q3UN04 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.8■□□□□ 0.76
Usp30Q3UN04 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp30Q3UN04 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Usp30Q3UN04 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp30Q3UN04 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Usp30Q3UN04 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp30Q3UN04 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp30Q3UN04 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp30Q3UN04 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp30Q3UN04 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.79■□□□□ 0.76
Usp30Q3UN04 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.79■□□□□ 0.76
Usp30Q3UN04 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usp30Q3UN04 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp30Q3UN04 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp30Q3UN04 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Usp30Q3UN04 Reep4-203ENSMUST00000226563 1444 ntBASIC19.78■□□□□ 0.76
Usp30Q3UN04 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp30Q3UN04 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp30Q3UN04 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.78■□□□□ 0.76
Usp30Q3UN04 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp30Q3UN04 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp30Q3UN04 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp30Q3UN04 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp30Q3UN04 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.78■□□□□ 0.76
Usp30Q3UN04 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp30Q3UN04 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp30Q3UN04 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp30Q3UN04 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp30Q3UN04 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp30Q3UN04 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Usp30Q3UN04 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp30Q3UN04 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp30Q3UN04 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp30Q3UN04 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp30Q3UN04 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp30Q3UN04 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp30Q3UN04 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.76■□□□□ 0.75
Usp30Q3UN04 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp30Q3UN04 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp30Q3UN04 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp30Q3UN04 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Usp30Q3UN04 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp30Q3UN04 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Usp30Q3UN04 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp30Q3UN04 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp30Q3UN04 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp30Q3UN04 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp30Q3UN04 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp30Q3UN04 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp30Q3UN04 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.74■□□□□ 0.75
Usp30Q3UN04 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.74■□□□□ 0.75
Usp30Q3UN04 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.74■□□□□ 0.75
Usp30Q3UN04 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Usp30Q3UN04 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp30Q3UN04 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp30Q3UN04 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp30Q3UN04 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp30Q3UN04 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Usp30Q3UN04 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp30Q3UN04 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.73■□□□□ 0.75
Usp30Q3UN04 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp30Q3UN04 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp30Q3UN04 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp30Q3UN04 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp30Q3UN04 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Usp30Q3UN04 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.73■□□□□ 0.75
Usp30Q3UN04 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Usp30Q3UN04 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.72■□□□□ 0.75
Usp30Q3UN04 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Usp30Q3UN04 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Usp30Q3UN04 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp30Q3UN04 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Usp30Q3UN04 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp30Q3UN04 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Usp30Q3UN04 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp30Q3UN04 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp30Q3UN04 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp30Q3UN04 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp30Q3UN04 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp30Q3UN04 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.71■□□□□ 0.75
Usp30Q3UN04 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp30Q3UN04 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Usp30Q3UN04 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.71■□□□□ 0.75
Usp30Q3UN04 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp30Q3UN04 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms