Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln6Q3U466 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cln6Q3U466 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cln6Q3U466 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln6Q3U466 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cln6Q3U466 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln6Q3U466 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln6Q3U466 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.69■□□□□ 0.26
Cln6Q3U466 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cln6Q3U466 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.69■□□□□ 0.26
Cln6Q3U466 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln6Q3U466 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cln6Q3U466 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln6Q3U466 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cln6Q3U466 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.69■□□□□ 0.26
Cln6Q3U466 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln6Q3U466 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln6Q3U466 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cln6Q3U466 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cln6Q3U466 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cln6Q3U466 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.68■□□□□ 0.26
Cln6Q3U466 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cln6Q3U466 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln6Q3U466 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln6Q3U466 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln6Q3U466 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.67■□□□□ 0.26
Cln6Q3U466 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln6Q3U466 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cln6Q3U466 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.67■□□□□ 0.26
Cln6Q3U466 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln6Q3U466 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln6Q3U466 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cln6Q3U466 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.67■□□□□ 0.26
Cln6Q3U466 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cln6Q3U466 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.66■□□□□ 0.26
Cln6Q3U466 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cln6Q3U466 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln6Q3U466 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln6Q3U466 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln6Q3U466 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln6Q3U466 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln6Q3U466 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Cln6Q3U466 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln6Q3U466 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln6Q3U466 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cln6Q3U466 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.65■□□□□ 0.26
Cln6Q3U466 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.65■□□□□ 0.26
Cln6Q3U466 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cln6Q3U466 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cln6Q3U466 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.64■□□□□ 0.25
Cln6Q3U466 Gm7143-201ENSMUST00000222811 859 ntBASIC16.64■□□□□ 0.25
Cln6Q3U466 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cln6Q3U466 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cln6Q3U466 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cln6Q3U466 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cln6Q3U466 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cln6Q3U466 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cln6Q3U466 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cln6Q3U466 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cln6Q3U466 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.63■□□□□ 0.25
Cln6Q3U466 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cln6Q3U466 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.63■□□□□ 0.25
Cln6Q3U466 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cln6Q3U466 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cln6Q3U466 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
Cln6Q3U466 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cln6Q3U466 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cln6Q3U466 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cln6Q3U466 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cln6Q3U466 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cln6Q3U466 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cln6Q3U466 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Cln6Q3U466 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms