Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc4Q3TCX3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc4Q3TCX3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc4Q3TCX3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc4Q3TCX3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc4Q3TCX3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc4Q3TCX3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc4Q3TCX3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Khdc4Q3TCX3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc4Q3TCX3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc4Q3TCX3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc4Q3TCX3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc4Q3TCX3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc4Q3TCX3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc4Q3TCX3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc4Q3TCX3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc4Q3TCX3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Khdc4Q3TCX3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc4Q3TCX3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc4Q3TCX3 Gm10493-201ENSMUST00000097270 612 ntBASIC18.59■□□□□ 0.57
Khdc4Q3TCX3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc4Q3TCX3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.58■□□□□ 0.57
Khdc4Q3TCX3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Khdc4Q3TCX3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.58■□□□□ 0.57
Khdc4Q3TCX3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Khdc4Q3TCX3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Khdc4Q3TCX3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.58■□□□□ 0.56
Khdc4Q3TCX3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Khdc4Q3TCX3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Khdc4Q3TCX3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.58■□□□□ 0.56
Khdc4Q3TCX3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Khdc4Q3TCX3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Khdc4Q3TCX3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Khdc4Q3TCX3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc4Q3TCX3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.57■□□□□ 0.56
Khdc4Q3TCX3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.57■□□□□ 0.56
Khdc4Q3TCX3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc4Q3TCX3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Khdc4Q3TCX3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc4Q3TCX3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc4Q3TCX3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc4Q3TCX3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Khdc4Q3TCX3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Khdc4Q3TCX3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc4Q3TCX3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc4Q3TCX3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc4Q3TCX3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms