Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ush2AQ2QI47 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ush2AQ2QI47 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ush2AQ2QI47 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ush2AQ2QI47 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ush2AQ2QI47 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Gm7889-201ENSMUST00000185591 958 ntBASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Ush2AQ2QI47 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Gm11539-201ENSMUST00000119837 557 ntBASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Gm13436-201ENSMUST00000120418 567 ntBASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ush2AQ2QI47 Gm23634-201ENSMUST00000175071 91 ntBASIC10.76□□□□□ -0.69
Ush2AQ2QI47 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC10.75□□□□□ -0.69
Ush2AQ2QI47 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ush2AQ2QI47 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC10.74□□□□□ -0.69
Ush2AQ2QI47 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ush2AQ2QI47 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ush2AQ2QI47 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ush2AQ2QI47 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ush2AQ2QI47 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ush2AQ2QI47 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ush2AQ2QI47 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ush2AQ2QI47 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ush2AQ2QI47 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Gm13509-201ENSMUST00000119733 1308 ntBASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ush2AQ2QI47 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms