Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd8Q09XV5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Chd8Q09XV5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chd8Q09XV5 Gm18666-201ENSMUST00000190039 958 ntBASIC17.91■□□□□ 0.46
Chd8Q09XV5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd8Q09XV5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Chd8Q09XV5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chd8Q09XV5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd8Q09XV5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chd8Q09XV5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chd8Q09XV5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chd8Q09XV5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd8Q09XV5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd8Q09XV5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Chd8Q09XV5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd8Q09XV5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Chd8Q09XV5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.89■□□□□ 0.45
Chd8Q09XV5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd8Q09XV5 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.89■□□□□ 0.45
Chd8Q09XV5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.89■□□□□ 0.45
Chd8Q09XV5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd8Q09XV5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd8Q09XV5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd8Q09XV5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Chd8Q09XV5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.87■□□□□ 0.45
Chd8Q09XV5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd8Q09XV5 Gm43514-201ENSMUST00000198852 424 ntBASIC17.87■□□□□ 0.45
Chd8Q09XV5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd8Q09XV5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd8Q09XV5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd8Q09XV5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd8Q09XV5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Chd8Q09XV5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd8Q09XV5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.87■□□□□ 0.45
Chd8Q09XV5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.87■□□□□ 0.45
Chd8Q09XV5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.86■□□□□ 0.45
Chd8Q09XV5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.86■□□□□ 0.45
Chd8Q09XV5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd8Q09XV5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
Chd8Q09XV5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd8Q09XV5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd8Q09XV5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd8Q09XV5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd8Q09XV5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.86■□□□□ 0.45
Chd8Q09XV5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chd8Q09XV5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd8Q09XV5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.86■□□□□ 0.45
Chd8Q09XV5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chd8Q09XV5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd8Q09XV5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd8Q09XV5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd8Q09XV5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd8Q09XV5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd8Q09XV5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.85■□□□□ 0.45
Chd8Q09XV5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chd8Q09XV5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd8Q09XV5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chd8Q09XV5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd8Q09XV5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.85■□□□□ 0.45
Chd8Q09XV5 Gm14859-201ENSMUST00000117752 357 ntBASIC17.85■□□□□ 0.45
Chd8Q09XV5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd8Q09XV5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd8Q09XV5 Gm10013-201ENSMUST00000106074 672 ntBASIC17.84■□□□□ 0.45
Chd8Q09XV5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chd8Q09XV5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd8Q09XV5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd8Q09XV5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chd8Q09XV5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.83■□□□□ 0.44
Chd8Q09XV5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Chd8Q09XV5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd8Q09XV5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd8Q09XV5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Chd8Q09XV5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Chd8Q09XV5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Chd8Q09XV5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd8Q09XV5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.82■□□□□ 0.44
Chd8Q09XV5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.82■□□□□ 0.44
Chd8Q09XV5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd8Q09XV5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd8Q09XV5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd8Q09XV5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.82■□□□□ 0.44
Chd8Q09XV5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd8Q09XV5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd8Q09XV5 Gm6345-202ENSMUST00000180900 204 ntBASIC17.81■□□□□ 0.44
Chd8Q09XV5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd8Q09XV5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd8Q09XV5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Chd8Q09XV5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms