Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brca2P97929 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Brca2P97929 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca2P97929 Gm26524-201ENSMUST00000192339 390 ntBASIC19.25■□□□□ 0.67
Brca2P97929 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.25■□□□□ 0.67
Brca2P97929 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.25■□□□□ 0.67
Brca2P97929 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Brca2P97929 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brca2P97929 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Brca2P97929 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Brca2P97929 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Brca2P97929 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Brca2P97929 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.24■□□□□ 0.67
Brca2P97929 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.24■□□□□ 0.67
Brca2P97929 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brca2P97929 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brca2P97929 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.23■□□□□ 0.67
Brca2P97929 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Brca2P97929 Gm715-201ENSMUST00000117865 831 ntBASIC19.23■□□□□ 0.67
Brca2P97929 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.23■□□□□ 0.67
Brca2P97929 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.23■□□□□ 0.67
Brca2P97929 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brca2P97929 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Brca2P97929 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.23■□□□□ 0.67
Brca2P97929 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Brca2P97929 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brca2P97929 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.23■□□□□ 0.67
Brca2P97929 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Brca2P97929 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Brca2P97929 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca2P97929 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca2P97929 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.22■□□□□ 0.67
Brca2P97929 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca2P97929 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca2P97929 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Brca2P97929 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca2P97929 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Brca2P97929 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.22■□□□□ 0.67
Brca2P97929 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.22■□□□□ 0.67
Brca2P97929 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Brca2P97929 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.21■□□□□ 0.67
Brca2P97929 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Brca2P97929 Gm6365-201ENSMUST00000054711 744 ntBASIC19.21■□□□□ 0.67
Brca2P97929 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca2P97929 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Brca2P97929 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Brca2P97929 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.21■□□□□ 0.67
Brca2P97929 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.2■□□□□ 0.66
Brca2P97929 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca2P97929 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca2P97929 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca2P97929 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca2P97929 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca2P97929 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.2■□□□□ 0.66
Brca2P97929 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.2■□□□□ 0.66
Brca2P97929 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.2■□□□□ 0.66
Brca2P97929 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca2P97929 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca2P97929 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Brca2P97929 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.19■□□□□ 0.66
Brca2P97929 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brca2P97929 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brca2P97929 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Brca2P97929 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.19■□□□□ 0.66
Brca2P97929 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Brca2P97929 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.19■□□□□ 0.66
Brca2P97929 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Brca2P97929 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Brca2P97929 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca2P97929 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca2P97929 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca2P97929 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca2P97929 Gm27275-201ENSMUST00000184318 272 ntBASIC19.18■□□□□ 0.66
Brca2P97929 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.18■□□□□ 0.66
Brca2P97929 Gm21362-201ENSMUST00000194272 928 ntBASIC19.17■□□□□ 0.66
Brca2P97929 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca2P97929 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca2P97929 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Brca2P97929 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca2P97929 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Brca2P97929 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca2P97929 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.17■□□□□ 0.66
Brca2P97929 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Brca2P97929 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Brca2P97929 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca2P97929 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.16■□□□□ 0.66
Brca2P97929 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Brca2P97929 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca2P97929 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.16■□□□□ 0.66
Brca2P97929 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Brca2P97929 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca2P97929 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca2P97929 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca2P97929 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.16■□□□□ 0.66
Brca2P97929 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Brca2P97929 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.16■□□□□ 0.66
Brca2P97929 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.16■□□□□ 0.66
Brca2P97929 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Brca2P97929 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.15■□□□□ 0.66
Brca2P97929 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms