Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trim43cP86449 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim43cP86449 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.45■■□□□ 1.02
Trim43cP86449 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim43cP86449 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim43cP86449 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim43cP86449 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim43cP86449 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim43cP86449 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim43cP86449 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim43cP86449 Serp2-204ENSMUST00000228055 705 ntBASIC21.44■■□□□ 1.02
Trim43cP86449 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Trim43cP86449 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim43cP86449 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim43cP86449 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim43cP86449 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim43cP86449 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.43■■□□□ 1.02
Trim43cP86449 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim43cP86449 AA386476-201ENSMUST00000098781 1665 ntBASIC21.43■■□□□ 1.02
Trim43cP86449 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim43cP86449 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim43cP86449 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim43cP86449 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim43cP86449 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim43cP86449 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
Trim43cP86449 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim43cP86449 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim43cP86449 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim43cP86449 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim43cP86449 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim43cP86449 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim43cP86449 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim43cP86449 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trim43cP86449 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim43cP86449 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim43cP86449 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim43cP86449 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.41■■□□□ 1.02
Trim43cP86449 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trim43cP86449 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim43cP86449 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
Trim43cP86449 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim43cP86449 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim43cP86449 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim43cP86449 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim43cP86449 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Trim43cP86449 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Trim43cP86449 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim43cP86449 Gm43173-201ENSMUST00000202246 593 ntBASIC21.4■■□□□ 1.02
Trim43cP86449 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim43cP86449 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim43cP86449 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trim43cP86449 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim43cP86449 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim43cP86449 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim43cP86449 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim43cP86449 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim43cP86449 Gm12821-201ENSMUST00000120022 600 ntBASIC21.39■■□□□ 1.01
Trim43cP86449 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim43cP86449 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim43cP86449 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.39■■□□□ 1.01
Trim43cP86449 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim43cP86449 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim43cP86449 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim43cP86449 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim43cP86449 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim43cP86449 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim43cP86449 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim43cP86449 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim43cP86449 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim43cP86449 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim43cP86449 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim43cP86449 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.38■■□□□ 1.01
Trim43cP86449 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim43cP86449 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim43cP86449 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Trim43cP86449 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Trim43cP86449 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Trim43cP86449 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.37■■□□□ 1.01
Trim43cP86449 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Trim43cP86449 Mir7075-201ENSMUST00000184187 82 ntBASIC21.37■■□□□ 1.01
Trim43cP86449 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.37■■□□□ 1.01
Trim43cP86449 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.37■■□□□ 1.01
Trim43cP86449 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Gm6139-201ENSMUST00000079261 882 ntBASIC21.37■■□□□ 1.01
Trim43cP86449 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim43cP86449 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim43cP86449 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms