Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Traf6P70196 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Traf6P70196 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.29■□□□□ 0.68
Traf6P70196 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Traf6P70196 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Traf6P70196 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Traf6P70196 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Traf6P70196 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Traf6P70196 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Traf6P70196 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.28■□□□□ 0.68
Traf6P70196 Mir6236-201ENSMUST00000184437 123 ntBASIC19.28■□□□□ 0.68
Traf6P70196 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Traf6P70196 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Traf6P70196 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.28■□□□□ 0.68
Traf6P70196 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Traf6P70196 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Traf6P70196 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Traf6P70196 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Traf6P70196 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Traf6P70196 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Traf6P70196 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Traf6P70196 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Traf6P70196 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Traf6P70196 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Traf6P70196 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
Traf6P70196 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Traf6P70196 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Traf6P70196 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.27■□□□□ 0.68
Traf6P70196 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Traf6P70196 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf6P70196 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Traf6P70196 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf6P70196 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Traf6P70196 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Traf6P70196 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.26■□□□□ 0.67
Traf6P70196 Gm22238-201ENSMUST00000175222 88 ntBASIC19.26■□□□□ 0.67
Traf6P70196 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.26■□□□□ 0.67
Traf6P70196 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Traf6P70196 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Traf6P70196 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Traf6P70196 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Traf6P70196 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Traf6P70196 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Traf6P70196 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Traf6P70196 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Traf6P70196 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Traf6P70196 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Traf6P70196 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Traf6P70196 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Traf6P70196 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Traf6P70196 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Traf6P70196 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Traf6P70196 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Traf6P70196 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Traf6P70196 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Traf6P70196 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Traf6P70196 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.24■□□□□ 0.67
Traf6P70196 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Traf6P70196 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.24■□□□□ 0.67
Traf6P70196 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Traf6P70196 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.24■□□□□ 0.67
Traf6P70196 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Traf6P70196 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Traf6P70196 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Traf6P70196 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Traf6P70196 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Traf6P70196 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.23■□□□□ 0.67
Traf6P70196 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Traf6P70196 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Traf6P70196 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Traf6P70196 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Traf6P70196 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Traf6P70196 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Traf6P70196 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.23■□□□□ 0.67
Traf6P70196 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Traf6P70196 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.23■□□□□ 0.67
Traf6P70196 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Traf6P70196 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Traf6P70196 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Traf6P70196 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Traf6P70196 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Traf6P70196 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Traf6P70196 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.21■□□□□ 0.67
Traf6P70196 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Traf6P70196 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.21■□□□□ 0.67
Traf6P70196 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Traf6P70196 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Traf6P70196 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Traf6P70196 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Traf6P70196 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Traf6P70196 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Traf6P70196 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Traf6P70196 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Traf6P70196 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Traf6P70196 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Traf6P70196 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Traf6P70196 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf6P70196 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Traf6P70196 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Traf6P70196 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms