Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six5P70178 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six5P70178 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six5P70178 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Six5P70178 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six5P70178 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Six5P70178 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Six5P70178 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Six5P70178 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six5P70178 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Six5P70178 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six5P70178 Gm27454-201ENSMUST00000185090 204 ntBASIC18.35■□□□□ 0.53
Six5P70178 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Six5P70178 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.35■□□□□ 0.53
Six5P70178 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Six5P70178 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Six5P70178 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six5P70178 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Six5P70178 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Six5P70178 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
Six5P70178 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.34■□□□□ 0.53
Six5P70178 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.34■□□□□ 0.53
Six5P70178 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Six5P70178 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Six5P70178 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.33■□□□□ 0.53
Six5P70178 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Six5P70178 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Six5P70178 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Six5P70178 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Six5P70178 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Six5P70178 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Six5P70178 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Six5P70178 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Six5P70178 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Six5P70178 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.33■□□□□ 0.52
Six5P70178 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six5P70178 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Six5P70178 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six5P70178 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six5P70178 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six5P70178 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six5P70178 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Six5P70178 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six5P70178 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six5P70178 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.32■□□□□ 0.52
Six5P70178 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six5P70178 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six5P70178 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Six5P70178 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Six5P70178 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six5P70178 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six5P70178 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six5P70178 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.32■□□□□ 0.52
Six5P70178 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Six5P70178 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Six5P70178 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six5P70178 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six5P70178 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Six5P70178 Gm12251-201ENSMUST00000117893 792 ntBASIC18.31■□□□□ 0.52
Six5P70178 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Six5P70178 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six5P70178 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.31■□□□□ 0.52
Six5P70178 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.31■□□□□ 0.52
Six5P70178 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six5P70178 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six5P70178 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six5P70178 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six5P70178 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six5P70178 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six5P70178 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six5P70178 Mir7075-201ENSMUST00000184187 82 ntBASIC18.3■□□□□ 0.52
Six5P70178 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.3■□□□□ 0.52
Six5P70178 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.3■□□□□ 0.52
Six5P70178 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Six5P70178 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six5P70178 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six5P70178 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six5P70178 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six5P70178 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Six5P70178 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six5P70178 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Six5P70178 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six5P70178 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six5P70178 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six5P70178 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six5P70178 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.29■□□□□ 0.52
Six5P70178 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Six5P70178 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Six5P70178 AA386476-201ENSMUST00000098781 1665 ntBASIC18.28■□□□□ 0.52
Six5P70178 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms