Protein–RNA interactions for Protein: P62823

Rab3c, Ras-related protein Rab-3C, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3cP62823 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.64■□□□□ 0.25
Rab3cP62823 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rab3cP62823 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab3cP62823 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rab3cP62823 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Rab3cP62823 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab3cP62823 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rab3cP62823 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab3cP62823 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab3cP62823 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.63■□□□□ 0.25
Rab3cP62823 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rab3cP62823 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.63■□□□□ 0.25
Rab3cP62823 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rab3cP62823 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab3cP62823 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab3cP62823 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rab3cP62823 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab3cP62823 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab3cP62823 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Rab3cP62823 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab3cP62823 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rab3cP62823 Gm10399-202ENSMUST00000202768 748 ntBASIC16.62■□□□□ 0.25
Rab3cP62823 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.62■□□□□ 0.25
Rab3cP62823 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rab3cP62823 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Rab3cP62823 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab3cP62823 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.61■□□□□ 0.25
Rab3cP62823 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3cP62823 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3cP62823 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rab3cP62823 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3cP62823 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3cP62823 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3cP62823 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rab3cP62823 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3cP62823 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3cP62823 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rab3cP62823 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3cP62823 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.6■□□□□ 0.25
Rab3cP62823 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3cP62823 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3cP62823 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.6■□□□□ 0.25
Rab3cP62823 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3cP62823 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Rab3cP62823 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.6■□□□□ 0.25
Rab3cP62823 Gm45444-201ENSMUST00000211394 898 ntBASIC16.6■□□□□ 0.25
Rab3cP62823 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rab3cP62823 Golph3-205ENSMUST00000228671 2842 ntBASIC16.6■□□□□ 0.25
Rab3cP62823 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.6■□□□□ 0.25
Rab3cP62823 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3cP62823 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Rab3cP62823 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3cP62823 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rab3cP62823 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3cP62823 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3cP62823 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.59■□□□□ 0.25
Rab3cP62823 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.59■□□□□ 0.25
Rab3cP62823 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3cP62823 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.59■□□□□ 0.25
Rab3cP62823 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3cP62823 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3cP62823 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3cP62823 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rab3cP62823 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3cP62823 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.58■□□□□ 0.25
Rab3cP62823 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab3cP62823 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab3cP62823 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3cP62823 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3cP62823 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3cP62823 Gm7143-201ENSMUST00000222811 859 ntBASIC16.58■□□□□ 0.24
Rab3cP62823 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3cP62823 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3cP62823 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3cP62823 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3cP62823 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms