Protein–RNA interactions for Protein: P58269

Dpf3, Zinc finger protein DPF3, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dpf3P58269 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Dpf3P58269 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.2■□□□□ 0.99
Dpf3P58269 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Dpf3P58269 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Dpf3P58269 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dpf3P58269 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Dpf3P58269 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Dpf3P58269 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.2■□□□□ 0.98
Dpf3P58269 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Dpf3P58269 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.2■□□□□ 0.98
Dpf3P58269 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dpf3P58269 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dpf3P58269 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Dpf3P58269 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dpf3P58269 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dpf3P58269 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.19■□□□□ 0.98
Dpf3P58269 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Dpf3P58269 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dpf3P58269 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Dpf3P58269 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.18■□□□□ 0.98
Dpf3P58269 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Dpf3P58269 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Dpf3P58269 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Dpf3P58269 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dpf3P58269 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Dpf3P58269 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.17■□□□□ 0.98
Dpf3P58269 Gm13148-201ENSMUST00000118892 745 ntBASIC21.17■□□□□ 0.98
Dpf3P58269 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Dpf3P58269 Gm37856-201ENSMUST00000191634 999 ntBASIC21.17■□□□□ 0.98
Dpf3P58269 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.17■□□□□ 0.98
Dpf3P58269 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.17■□□□□ 0.98
Dpf3P58269 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Dpf3P58269 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Dpf3P58269 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dpf3P58269 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Dpf3P58269 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dpf3P58269 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dpf3P58269 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Dpf3P58269 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.16■□□□□ 0.98
Dpf3P58269 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Dpf3P58269 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.16■□□□□ 0.98
Dpf3P58269 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
Dpf3P58269 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Dpf3P58269 Gm6365-201ENSMUST00000054711 744 ntBASIC21.16■□□□□ 0.98
Dpf3P58269 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Dpf3P58269 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dpf3P58269 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dpf3P58269 Gm7290-201ENSMUST00000104990 617 ntBASIC21.15■□□□□ 0.98
Dpf3P58269 Gm12918-201ENSMUST00000120234 636 ntBASIC21.15■□□□□ 0.98
Dpf3P58269 Gm15710-201ENSMUST00000121821 636 ntBASIC21.15■□□□□ 0.98
Dpf3P58269 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Dpf3P58269 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Dpf3P58269 Gm5075-201ENSMUST00000196916 622 ntBASIC21.15■□□□□ 0.98
Dpf3P58269 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dpf3P58269 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.15■□□□□ 0.98
Dpf3P58269 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dpf3P58269 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.15■□□□□ 0.98
Dpf3P58269 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.15■□□□□ 0.98
Dpf3P58269 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Dpf3P58269 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.14■□□□□ 0.97
Dpf3P58269 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Dpf3P58269 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.14■□□□□ 0.97
Dpf3P58269 Trmt13-210ENSMUST00000198454 880 ntBASIC21.14■□□□□ 0.97
Dpf3P58269 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.14■□□□□ 0.97
Dpf3P58269 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dpf3P58269 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dpf3P58269 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dpf3P58269 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dpf3P58269 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dpf3P58269 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dpf3P58269 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dpf3P58269 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.13■□□□□ 0.97
Dpf3P58269 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dpf3P58269 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dpf3P58269 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dpf3P58269 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dpf3P58269 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.12■□□□□ 0.97
Dpf3P58269 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dpf3P58269 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.12■□□□□ 0.97
Dpf3P58269 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Dpf3P58269 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.12■□□□□ 0.97
Dpf3P58269 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.12■□□□□ 0.97
Dpf3P58269 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dpf3P58269 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dpf3P58269 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dpf3P58269 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dpf3P58269 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dpf3P58269 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Dpf3P58269 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Dpf3P58269 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Dpf3P58269 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Dpf3P58269 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Dpf3P58269 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.11■□□□□ 0.97
Dpf3P58269 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dpf3P58269 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dpf3P58269 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dpf3P58269 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.1■□□□□ 0.97
Dpf3P58269 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Dpf3P58269 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dpf3P58269 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms