Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1P56716 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1P56716 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1P56716 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.28■□□□□ 0.84
Rp1P56716 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1P56716 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1P56716 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1P56716 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1P56716 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rp1P56716 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1P56716 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Rp1P56716 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rp1P56716 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rp1P56716 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.27■□□□□ 0.84
Rp1P56716 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rp1P56716 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rp1P56716 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.27■□□□□ 0.84
Rp1P56716 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.26■□□□□ 0.83
Rp1P56716 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Rp1P56716 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1P56716 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1P56716 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1P56716 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1P56716 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rp1P56716 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.26■□□□□ 0.83
Rp1P56716 Gm6211-202ENSMUST00000167849 925 ntBASIC20.26■□□□□ 0.83
Rp1P56716 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.26■□□□□ 0.83
Rp1P56716 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1P56716 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1P56716 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.25■□□□□ 0.83
Rp1P56716 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1P56716 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rp1P56716 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1P56716 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1P56716 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1P56716 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1P56716 Gm7290-201ENSMUST00000104990 617 ntBASIC20.25■□□□□ 0.83
Rp1P56716 Gm12918-201ENSMUST00000120234 636 ntBASIC20.25■□□□□ 0.83
Rp1P56716 Gm15710-201ENSMUST00000121821 636 ntBASIC20.25■□□□□ 0.83
Rp1P56716 Gm38205-201ENSMUST00000192243 258 ntBASIC20.25■□□□□ 0.83
Rp1P56716 Gm5075-201ENSMUST00000196916 622 ntBASIC20.25■□□□□ 0.83
Rp1P56716 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.25■□□□□ 0.83
Rp1P56716 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.25■□□□□ 0.83
Rp1P56716 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rp1P56716 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1P56716 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1P56716 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.24■□□□□ 0.83
Rp1P56716 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.24■□□□□ 0.83
Rp1P56716 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1P56716 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.24■□□□□ 0.83
Rp1P56716 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1P56716 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1P56716 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1P56716 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Rp1P56716 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rp1P56716 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Rp1P56716 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1P56716 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rp1P56716 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1P56716 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1P56716 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1P56716 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1P56716 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1P56716 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1P56716 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1P56716 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1P56716 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1P56716 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.23■□□□□ 0.83
Rp1P56716 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
Rp1P56716 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rp1P56716 Gm13534-201ENSMUST00000121169 513 ntBASIC20.22■□□□□ 0.83
Rp1P56716 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rp1P56716 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.22■□□□□ 0.83
Rp1P56716 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rp1P56716 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rp1P56716 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rp1P56716 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.22■□□□□ 0.83
Rp1P56716 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.22■□□□□ 0.83
Rp1P56716 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.22■□□□□ 0.83
Rp1P56716 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.22■□□□□ 0.83
Rp1P56716 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rp1P56716 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1P56716 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1P56716 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.21■□□□□ 0.83
Rp1P56716 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rp1P56716 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1P56716 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1P56716 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1P56716 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.21■□□□□ 0.83
Rp1P56716 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1P56716 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1P56716 Gm26524-201ENSMUST00000192339 390 ntBASIC20.21■□□□□ 0.83
Rp1P56716 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1P56716 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.21■□□□□ 0.83
Rp1P56716 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1P56716 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1P56716 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.21■□□□□ 0.83
Rp1P56716 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.2■□□□□ 0.82
Rp1P56716 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rp1P56716 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms