Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.74■□□□□ 0.59
Sox3P53784 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox3P53784 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox3P53784 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.74■□□□□ 0.59
Sox3P53784 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sox3P53784 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox3P53784 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox3P53784 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sox3P53784 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox3P53784 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Sox3P53784 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox3P53784 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox3P53784 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sox3P53784 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.72■□□□□ 0.59
Sox3P53784 Gm40848-201ENSMUST00000221998 324 ntBASIC18.72■□□□□ 0.59
Sox3P53784 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox3P53784 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox3P53784 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox3P53784 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox3P53784 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.71■□□□□ 0.59
Sox3P53784 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox3P53784 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox3P53784 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox3P53784 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox3P53784 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox3P53784 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.7■□□□□ 0.58
Sox3P53784 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox3P53784 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox3P53784 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.7■□□□□ 0.58
Sox3P53784 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox3P53784 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox3P53784 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sox3P53784 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox3P53784 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox3P53784 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sox3P53784 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox3P53784 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox3P53784 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Sox3P53784 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox3P53784 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox3P53784 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox3P53784 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox3P53784 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.69■□□□□ 0.58
Sox3P53784 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.69■□□□□ 0.58
Sox3P53784 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.69■□□□□ 0.58
Sox3P53784 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox3P53784 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox3P53784 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox3P53784 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox3P53784 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox3P53784 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox3P53784 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox3P53784 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Sox3P53784 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sox3P53784 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox3P53784 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox3P53784 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox3P53784 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sox3P53784 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox3P53784 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox3P53784 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.68■□□□□ 0.58
Sox3P53784 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sox3P53784 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.68■□□□□ 0.58
Sox3P53784 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox3P53784 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox3P53784 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox3P53784 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox3P53784 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox3P53784 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox3P53784 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox3P53784 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox3P53784 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox3P53784 Gm12933-201ENSMUST00000120203 872 ntBASIC18.67■□□□□ 0.58
Sox3P53784 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox3P53784 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox3P53784 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox3P53784 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox3P53784 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sox3P53784 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox3P53784 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox3P53784 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox3P53784 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox3P53784 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox3P53784 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox3P53784 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox3P53784 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.66■□□□□ 0.58
Sox3P53784 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sox3P53784 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox3P53784 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.66■□□□□ 0.58
Sox3P53784 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox3P53784 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Sox3P53784 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox3P53784 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox3P53784 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox3P53784 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox3P53784 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox3P53784 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox3P53784 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox3P53784 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.65■□□□□ 0.58
Sox3P53784 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms