Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Krt6aP50446 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.46■□□□□ 0.71
Krt6aP50446 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Krt6aP50446 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt6aP50446 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.45■□□□□ 0.7
Krt6aP50446 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Krt6aP50446 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Krt6aP50446 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt6aP50446 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Krt6aP50446 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt6aP50446 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt6aP50446 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt6aP50446 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.44■□□□□ 0.7
Krt6aP50446 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt6aP50446 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.44■□□□□ 0.7
Krt6aP50446 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Krt6aP50446 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Krt6aP50446 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Krt6aP50446 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Krt6aP50446 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.43■□□□□ 0.7
Krt6aP50446 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.43■□□□□ 0.7
Krt6aP50446 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.43■□□□□ 0.7
Krt6aP50446 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Krt6aP50446 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.42■□□□□ 0.7
Krt6aP50446 Gm15820-201ENSMUST00000201566 728 ntBASIC19.42■□□□□ 0.7
Krt6aP50446 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.42■□□□□ 0.7
Krt6aP50446 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Krt6aP50446 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt6aP50446 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt6aP50446 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt6aP50446 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.41■□□□□ 0.7
Krt6aP50446 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Krt6aP50446 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt6aP50446 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Krt6aP50446 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Krt6aP50446 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Krt6aP50446 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Krt6aP50446 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt6aP50446 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt6aP50446 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Krt6aP50446 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Krt6aP50446 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Krt6aP50446 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.4■□□□□ 0.7
Krt6aP50446 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Krt6aP50446 Etf1-202ENSMUST00000180351 108 ntBASIC19.4■□□□□ 0.7
Krt6aP50446 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Krt6aP50446 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt6aP50446 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt6aP50446 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt6aP50446 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Krt6aP50446 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt6aP50446 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Krt6aP50446 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Krt6aP50446 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Krt6aP50446 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt6aP50446 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Krt6aP50446 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.39■□□□□ 0.69
Krt6aP50446 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt6aP50446 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Krt6aP50446 Gm7417-201ENSMUST00000192950 473 ntBASIC19.39■□□□□ 0.69
Krt6aP50446 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.39■□□□□ 0.69
Krt6aP50446 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt6aP50446 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt6aP50446 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt6aP50446 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt6aP50446 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Krt6aP50446 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Krt6aP50446 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt6aP50446 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Krt6aP50446 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Krt6aP50446 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.38■□□□□ 0.69
Krt6aP50446 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Krt6aP50446 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Krt6aP50446 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt6aP50446 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Krt6aP50446 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt6aP50446 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt6aP50446 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt6aP50446 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt6aP50446 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms