Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.22■□□□□ 0.19
Cdkn1aP39689 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdkn1aP39689 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.22■□□□□ 0.19
Cdkn1aP39689 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkn1aP39689 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkn1aP39689 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.21■□□□□ 0.19
Cdkn1aP39689 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.21■□□□□ 0.19
Cdkn1aP39689 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkn1aP39689 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkn1aP39689 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
Cdkn1aP39689 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkn1aP39689 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.21■□□□□ 0.19
Cdkn1aP39689 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkn1aP39689 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdkn1aP39689 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdkn1aP39689 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdkn1aP39689 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdkn1aP39689 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkn1aP39689 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkn1aP39689 Gm42642-201ENSMUST00000200683 355 ntBASIC16.18■□□□□ 0.18
Cdkn1aP39689 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.18■□□□□ 0.18
Cdkn1aP39689 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkn1aP39689 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdkn1aP39689 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdkn1aP39689 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.17■□□□□ 0.18
Cdkn1aP39689 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkn1aP39689 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn1aP39689 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn1aP39689 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn1aP39689 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkn1aP39689 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn1aP39689 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkn1aP39689 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkn1aP39689 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn1aP39689 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn1aP39689 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.16■□□□□ 0.18
Cdkn1aP39689 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkn1aP39689 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn1aP39689 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdkn1aP39689 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.15■□□□□ 0.18
Cdkn1aP39689 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdkn1aP39689 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn1aP39689 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdkn1aP39689 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn1aP39689 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkn1aP39689 Gm42778-201ENSMUST00000199644 553 ntBASIC16.15■□□□□ 0.18
Cdkn1aP39689 Gm42569-201ENSMUST00000200539 472 ntBASIC16.15■□□□□ 0.18
Cdkn1aP39689 Gm9988-201ENSMUST00000069786 435 ntBASIC16.15■□□□□ 0.18
Cdkn1aP39689 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn1aP39689 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkn1aP39689 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdkn1aP39689 Gm27801-201ENSMUST00000184174 223 ntBASIC16.14■□□□□ 0.17
Cdkn1aP39689 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.14■□□□□ 0.17
Cdkn1aP39689 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms