Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.58■□□□□ 0.89
Ccl5P30882 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccl5P30882 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccl5P30882 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Ccl5P30882 Gm12896-201ENSMUST00000118430 226 ntBASIC20.57■□□□□ 0.88
Ccl5P30882 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccl5P30882 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccl5P30882 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccl5P30882 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccl5P30882 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccl5P30882 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl5P30882 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccl5P30882 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccl5P30882 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl5P30882 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl5P30882 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl5P30882 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl5P30882 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl5P30882 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Ccl5P30882 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl5P30882 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl5P30882 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl5P30882 Gm15565-201ENSMUST00000118890 427 ntBASIC20.55■□□□□ 0.88
Ccl5P30882 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccl5P30882 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccl5P30882 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccl5P30882 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccl5P30882 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccl5P30882 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccl5P30882 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl5P30882 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl5P30882 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.54■□□□□ 0.88
Ccl5P30882 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccl5P30882 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl5P30882 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl5P30882 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl5P30882 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl5P30882 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl5P30882 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.54■□□□□ 0.88
Ccl5P30882 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl5P30882 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl5P30882 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl5P30882 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccl5P30882 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ccl5P30882 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ccl5P30882 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl5P30882 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl5P30882 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl5P30882 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl5P30882 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl5P30882 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl5P30882 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Ccl5P30882 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ccl5P30882 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccl5P30882 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.52■□□□□ 0.88
Ccl5P30882 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl5P30882 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl5P30882 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl5P30882 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.52■□□□□ 0.87
Ccl5P30882 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.52■□□□□ 0.87
Ccl5P30882 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccl5P30882 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccl5P30882 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccl5P30882 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccl5P30882 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.51■□□□□ 0.87
Ccl5P30882 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccl5P30882 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl5P30882 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.5■□□□□ 0.87
Ccl5P30882 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl5P30882 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccl5P30882 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl5P30882 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl5P30882 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl5P30882 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl5P30882 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl5P30882 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl5P30882 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccl5P30882 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Ccl5P30882 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccl5P30882 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Ccl5P30882 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.49■□□□□ 0.87
Ccl5P30882 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccl5P30882 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccl5P30882 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccl5P30882 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccl5P30882 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccl5P30882 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.49■□□□□ 0.87
Ccl5P30882 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccl5P30882 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccl5P30882 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccl5P30882 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccl5P30882 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccl5P30882 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccl5P30882 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
Ccl5P30882 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccl5P30882 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccl5P30882 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccl5P30882 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.47■□□□□ 0.87
Ccl5P30882 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccl5P30882 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms