Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RxrbP28704 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RxrbP28704 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RxrbP28704 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.76■□□□□ 0.75
RxrbP28704 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.76■□□□□ 0.75
RxrbP28704 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.76■□□□□ 0.75
RxrbP28704 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RxrbP28704 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RxrbP28704 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RxrbP28704 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RxrbP28704 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RxrbP28704 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RxrbP28704 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RxrbP28704 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.75■□□□□ 0.75
RxrbP28704 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RxrbP28704 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RxrbP28704 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RxrbP28704 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RxrbP28704 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RxrbP28704 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RxrbP28704 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RxrbP28704 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RxrbP28704 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RxrbP28704 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RxrbP28704 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RxrbP28704 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RxrbP28704 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.74■□□□□ 0.75
RxrbP28704 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RxrbP28704 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RxrbP28704 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.74■□□□□ 0.75
RxrbP28704 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.74■□□□□ 0.75
RxrbP28704 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RxrbP28704 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RxrbP28704 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.73■□□□□ 0.75
RxrbP28704 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RxrbP28704 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RxrbP28704 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RxrbP28704 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RxrbP28704 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RxrbP28704 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RxrbP28704 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RxrbP28704 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.72■□□□□ 0.75
RxrbP28704 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.72■□□□□ 0.75
RxrbP28704 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RxrbP28704 Gm10232-201ENSMUST00000089221 720 ntBASIC19.72■□□□□ 0.75
RxrbP28704 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RxrbP28704 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RxrbP28704 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RxrbP28704 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RxrbP28704 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.71■□□□□ 0.75
RxrbP28704 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RxrbP28704 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 Rarb-207ENSMUST00000225921 2756 ntBASIC19.71■□□□□ 0.75
RxrbP28704 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.71■□□□□ 0.75
RxrbP28704 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.71■□□□□ 0.75
RxrbP28704 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RxrbP28704 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RxrbP28704 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RxrbP28704 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RxrbP28704 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RxrbP28704 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
RxrbP28704 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.69■□□□□ 0.74
RxrbP28704 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RxrbP28704 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.69■□□□□ 0.74
RxrbP28704 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RxrbP28704 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.69■□□□□ 0.74
RxrbP28704 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RxrbP28704 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RxrbP28704 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RxrbP28704 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RxrbP28704 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RxrbP28704 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RxrbP28704 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RxrbP28704 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RxrbP28704 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RxrbP28704 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RxrbP28704 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RxrbP28704 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RxrbP28704 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RxrbP28704 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
RxrbP28704 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms