Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afxP27661 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.63■□□□□ 0.89
H2afxP27661 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afxP27661 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afxP27661 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afxP27661 Gm8503-201ENSMUST00000118131 455 ntBASIC20.63■□□□□ 0.89
H2afxP27661 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.63■□□□□ 0.89
H2afxP27661 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afxP27661 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
H2afxP27661 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.62■□□□□ 0.89
H2afxP27661 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.62■□□□□ 0.89
H2afxP27661 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afxP27661 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afxP27661 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.62■□□□□ 0.89
H2afxP27661 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afxP27661 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afxP27661 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
H2afxP27661 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afxP27661 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afxP27661 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
H2afxP27661 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afxP27661 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
H2afxP27661 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afxP27661 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afxP27661 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.61■□□□□ 0.89
H2afxP27661 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afxP27661 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afxP27661 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.61■□□□□ 0.89
H2afxP27661 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.61■□□□□ 0.89
H2afxP27661 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2afxP27661 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2afxP27661 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afxP27661 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2afxP27661 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.61■□□□□ 0.89
H2afxP27661 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
H2afxP27661 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H2afxP27661 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
H2afxP27661 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
H2afxP27661 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afxP27661 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afxP27661 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.6■□□□□ 0.89
H2afxP27661 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afxP27661 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afxP27661 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
H2afxP27661 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2afxP27661 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2afxP27661 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afxP27661 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afxP27661 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afxP27661 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2afxP27661 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.59■□□□□ 0.89
H2afxP27661 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.59■□□□□ 0.89
H2afxP27661 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2afxP27661 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2afxP27661 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2afxP27661 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afxP27661 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afxP27661 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
H2afxP27661 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2afxP27661 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2afxP27661 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
H2afxP27661 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
H2afxP27661 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afxP27661 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
H2afxP27661 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.58■□□□□ 0.89
H2afxP27661 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H2afxP27661 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H2afxP27661 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
H2afxP27661 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
H2afxP27661 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
H2afxP27661 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
H2afxP27661 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afxP27661 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afxP27661 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afxP27661 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afxP27661 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
H2afxP27661 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afxP27661 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
H2afxP27661 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afxP27661 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.56■□□□□ 0.88
H2afxP27661 Gm11599-201ENSMUST00000118720 878 ntBASIC20.56■□□□□ 0.88
H2afxP27661 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afxP27661 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afxP27661 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afxP27661 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afxP27661 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afxP27661 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afxP27661 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
H2afxP27661 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afxP27661 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afxP27661 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afxP27661 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afxP27661 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afxP27661 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afxP27661 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afxP27661 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afxP27661 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afxP27661 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afxP27661 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afxP27661 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms