Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SnrpbP27048 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SnrpbP27048 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
SnrpbP27048 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SnrpbP27048 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SnrpbP27048 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SnrpbP27048 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SnrpbP27048 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SnrpbP27048 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SnrpbP27048 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SnrpbP27048 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.16■□□□□ 0.34
SnrpbP27048 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SnrpbP27048 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SnrpbP27048 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SnrpbP27048 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SnrpbP27048 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SnrpbP27048 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SnrpbP27048 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SnrpbP27048 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SnrpbP27048 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SnrpbP27048 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SnrpbP27048 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SnrpbP27048 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SnrpbP27048 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SnrpbP27048 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SnrpbP27048 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.15■□□□□ 0.34
SnrpbP27048 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
SnrpbP27048 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SnrpbP27048 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.15■□□□□ 0.34
SnrpbP27048 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.15■□□□□ 0.34
SnrpbP27048 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SnrpbP27048 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SnrpbP27048 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SnrpbP27048 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SnrpbP27048 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SnrpbP27048 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.14■□□□□ 0.33
SnrpbP27048 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SnrpbP27048 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SnrpbP27048 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SnrpbP27048 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SnrpbP27048 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SnrpbP27048 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SnrpbP27048 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SnrpbP27048 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SnrpbP27048 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SnrpbP27048 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SnrpbP27048 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SnrpbP27048 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SnrpbP27048 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SnrpbP27048 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SnrpbP27048 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SnrpbP27048 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SnrpbP27048 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SnrpbP27048 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SnrpbP27048 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SnrpbP27048 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SnrpbP27048 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SnrpbP27048 Gm11175-201ENSMUST00000116172 543 ntBASIC17.12■□□□□ 0.33
SnrpbP27048 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.12■□□□□ 0.33
SnrpbP27048 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SnrpbP27048 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SnrpbP27048 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SnrpbP27048 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SnrpbP27048 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SnrpbP27048 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SnrpbP27048 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SnrpbP27048 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SnrpbP27048 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SnrpbP27048 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SnrpbP27048 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SnrpbP27048 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SnrpbP27048 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SnrpbP27048 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SnrpbP27048 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SnrpbP27048 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.1■□□□□ 0.33
SnrpbP27048 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SnrpbP27048 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SnrpbP27048 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SnrpbP27048 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.1■□□□□ 0.33
SnrpbP27048 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SnrpbP27048 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SnrpbP27048 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SnrpbP27048 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SnrpbP27048 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SnrpbP27048 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SnrpbP27048 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.09■□□□□ 0.33
SnrpbP27048 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SnrpbP27048 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms