Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Aldh1a1P24549 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Aldh1a1P24549 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Aldh1a1P24549 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aldh1a1P24549 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aldh1a1P24549 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Aldh1a1P24549 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Aldh1a1P24549 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Aldh1a1P24549 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.18■□□□□ 0.98
Aldh1a1P24549 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.18■□□□□ 0.98
Aldh1a1P24549 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Aldh1a1P24549 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Aldh1a1P24549 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aldh1a1P24549 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Aldh1a1P24549 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Aldh1a1P24549 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.17■□□□□ 0.98
Aldh1a1P24549 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Aldh1a1P24549 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Aldh1a1P24549 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Aldh1a1P24549 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Aldh1a1P24549 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Aldh1a1P24549 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Aldh1a1P24549 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Aldh1a1P24549 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Aldh1a1P24549 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Aldh1a1P24549 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Aldh1a1P24549 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Aldh1a1P24549 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.16■□□□□ 0.98
Aldh1a1P24549 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.16■□□□□ 0.98
Aldh1a1P24549 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Aldh1a1P24549 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Aldh1a1P24549 Gm10812-201ENSMUST00000099864 546 ntBASIC21.16■□□□□ 0.98
Aldh1a1P24549 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Aldh1a1P24549 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Aldh1a1P24549 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Aldh1a1P24549 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Aldh1a1P24549 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Aldh1a1P24549 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Aldh1a1P24549 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Aldh1a1P24549 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.15■□□□□ 0.98
Aldh1a1P24549 Gm6211-202ENSMUST00000167849 925 ntBASIC21.15■□□□□ 0.98
Aldh1a1P24549 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Aldh1a1P24549 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.15■□□□□ 0.98
Aldh1a1P24549 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.15■□□□□ 0.98
Aldh1a1P24549 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Aldh1a1P24549 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Aldh1a1P24549 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Aldh1a1P24549 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Aldh1a1P24549 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Aldh1a1P24549 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Aldh1a1P24549 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.14■□□□□ 0.98
Aldh1a1P24549 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.14■□□□□ 0.98
Aldh1a1P24549 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Aldh1a1P24549 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Aldh1a1P24549 Gm6420-201ENSMUST00000193885 723 ntBASIC21.14■□□□□ 0.97
Aldh1a1P24549 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Aldh1a1P24549 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Aldh1a1P24549 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Aldh1a1P24549 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Aldh1a1P24549 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Aldh1a1P24549 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aldh1a1P24549 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Aldh1a1P24549 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aldh1a1P24549 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Aldh1a1P24549 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.13■□□□□ 0.97
Aldh1a1P24549 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.13■□□□□ 0.97
Aldh1a1P24549 Gm22325-201ENSMUST00000158904 308 ntBASIC21.13■□□□□ 0.97
Aldh1a1P24549 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aldh1a1P24549 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aldh1a1P24549 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Aldh1a1P24549 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aldh1a1P24549 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aldh1a1P24549 Mir7071-201ENSMUST00000184847 69 ntBASIC21.12■□□□□ 0.97
Aldh1a1P24549 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aldh1a1P24549 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Aldh1a1P24549 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aldh1a1P24549 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aldh1a1P24549 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
Aldh1a1P24549 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Aldh1a1P24549 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Aldh1a1P24549 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.11■□□□□ 0.97
Aldh1a1P24549 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Aldh1a1P24549 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.11■□□□□ 0.97
Aldh1a1P24549 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Aldh1a1P24549 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.11■□□□□ 0.97
Aldh1a1P24549 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Aldh1a1P24549 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Aldh1a1P24549 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Aldh1a1P24549 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Aldh1a1P24549 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Aldh1a1P24549 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Aldh1a1P24549 Gm13534-201ENSMUST00000121169 513 ntBASIC21.1■□□□□ 0.97
Aldh1a1P24549 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Aldh1a1P24549 Gm38205-201ENSMUST00000192243 258 ntBASIC21.1■□□□□ 0.97
Aldh1a1P24549 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Aldh1a1P24549 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Aldh1a1P24549 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.1■□□□□ 0.97
Aldh1a1P24549 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Aldh1a1P24549 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Aldh1a1P24549 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms