Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VimP20152 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VimP20152 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.94■□□□□ 0.78
VimP20152 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
VimP20152 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VimP20152 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VimP20152 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VimP20152 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.93■□□□□ 0.78
VimP20152 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.93■□□□□ 0.78
VimP20152 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VimP20152 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VimP20152 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VimP20152 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VimP20152 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VimP20152 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VimP20152 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VimP20152 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VimP20152 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VimP20152 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VimP20152 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VimP20152 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VimP20152 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VimP20152 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VimP20152 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VimP20152 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.92■□□□□ 0.78
VimP20152 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VimP20152 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.92■□□□□ 0.78
VimP20152 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.92■□□□□ 0.78
VimP20152 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VimP20152 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VimP20152 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VimP20152 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
VimP20152 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
VimP20152 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VimP20152 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
VimP20152 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VimP20152 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VimP20152 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VimP20152 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VimP20152 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VimP20152 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.91■□□□□ 0.78
VimP20152 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
VimP20152 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VimP20152 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VimP20152 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VimP20152 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VimP20152 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VimP20152 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VimP20152 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VimP20152 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VimP20152 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VimP20152 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
VimP20152 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
VimP20152 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
VimP20152 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VimP20152 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VimP20152 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
VimP20152 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VimP20152 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.89■□□□□ 0.77
VimP20152 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VimP20152 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VimP20152 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VimP20152 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
VimP20152 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
VimP20152 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VimP20152 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VimP20152 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VimP20152 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VimP20152 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VimP20152 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VimP20152 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VimP20152 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VimP20152 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VimP20152 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.88■□□□□ 0.77
VimP20152 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.88■□□□□ 0.77
VimP20152 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VimP20152 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VimP20152 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VimP20152 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
VimP20152 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
VimP20152 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
VimP20152 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Gm6311-201ENSMUST00000073790 878 ntBASIC19.87■□□□□ 0.77
VimP20152 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VimP20152 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
VimP20152 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
VimP20152 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.86■□□□□ 0.77
VimP20152 Gm16437-201ENSMUST00000025669 507 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms