Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga1P17095 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga1P17095 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga1P17095 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.23■□□□□ 0.83
Hmga1P17095 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga1P17095 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Hmga1P17095 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga1P17095 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.23■□□□□ 0.83
Hmga1P17095 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga1P17095 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga1P17095 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga1P17095 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga1P17095 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga1P17095 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga1P17095 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga1P17095 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hmga1P17095 Gm37179-201ENSMUST00000194862 823 ntBASIC20.22■□□□□ 0.83
Hmga1P17095 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.22■□□□□ 0.83
Hmga1P17095 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.22■□□□□ 0.83
Hmga1P17095 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga1P17095 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga1P17095 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga1P17095 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga1P17095 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga1P17095 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga1P17095 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hmga1P17095 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hmga1P17095 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.21■□□□□ 0.83
Hmga1P17095 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmga1P17095 Gm13234-201ENSMUST00000120010 747 ntBASIC20.21■□□□□ 0.83
Hmga1P17095 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.21■□□□□ 0.83
Hmga1P17095 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmga1P17095 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.21■□□□□ 0.83
Hmga1P17095 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmga1P17095 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.21■□□□□ 0.83
Hmga1P17095 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hmga1P17095 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.21■□□□□ 0.83
Hmga1P17095 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmga1P17095 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmga1P17095 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmga1P17095 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmga1P17095 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hmga1P17095 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.2■□□□□ 0.82
Hmga1P17095 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga1P17095 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.2■□□□□ 0.82
Hmga1P17095 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.2■□□□□ 0.82
Hmga1P17095 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga1P17095 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga1P17095 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga1P17095 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga1P17095 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Hmga1P17095 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmga1P17095 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmga1P17095 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.19■□□□□ 0.82
Hmga1P17095 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.19■□□□□ 0.82
Hmga1P17095 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmga1P17095 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmga1P17095 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmga1P17095 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.18■□□□□ 0.82
Hmga1P17095 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Hmga1P17095 Gm29257-201ENSMUST00000186115 639 ntBASIC20.18■□□□□ 0.82
Hmga1P17095 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.18■□□□□ 0.82
Hmga1P17095 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.18■□□□□ 0.82
Hmga1P17095 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmga1P17095 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Hmga1P17095 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmga1P17095 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.17■□□□□ 0.82
Hmga1P17095 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmga1P17095 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Hmga1P17095 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmga1P17095 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmga1P17095 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hmga1P17095 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
Hmga1P17095 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmga1P17095 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Hmga1P17095 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmga1P17095 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmga1P17095 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.16■□□□□ 0.82
Hmga1P17095 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Hmga1P17095 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmga1P17095 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.16■□□□□ 0.82
Hmga1P17095 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmga1P17095 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmga1P17095 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmga1P17095 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmga1P17095 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmga1P17095 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga1P17095 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.15■□□□□ 0.82
Hmga1P17095 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga1P17095 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.15■□□□□ 0.82
Hmga1P17095 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga1P17095 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga1P17095 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga1P17095 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga1P17095 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga1P17095 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga1P17095 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga1P17095 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Hmga1P17095 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hmga1P17095 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms