Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccl3P10855 Gm4968-201ENSMUST00000071458 858 ntBASIC17.46■□□□□ 0.39
Ccl3P10855 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccl3P10855 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccl3P10855 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ccl3P10855 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccl3P10855 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccl3P10855 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccl3P10855 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccl3P10855 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccl3P10855 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccl3P10855 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccl3P10855 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccl3P10855 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl3P10855 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccl3P10855 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.44■□□□□ 0.38
Ccl3P10855 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl3P10855 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl3P10855 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl3P10855 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.44■□□□□ 0.38
Ccl3P10855 Gm38205-201ENSMUST00000192243 258 ntBASIC17.44■□□□□ 0.38
Ccl3P10855 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.44■□□□□ 0.38
Ccl3P10855 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.44■□□□□ 0.38
Ccl3P10855 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.44■□□□□ 0.38
Ccl3P10855 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl3P10855 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl3P10855 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl3P10855 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccl3P10855 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl3P10855 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl3P10855 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Ccl3P10855 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl3P10855 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Ccl3P10855 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl3P10855 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ccl3P10855 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccl3P10855 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl3P10855 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl3P10855 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl3P10855 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccl3P10855 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.43■□□□□ 0.38
Ccl3P10855 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccl3P10855 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl3P10855 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.42■□□□□ 0.38
Ccl3P10855 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl3P10855 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.42■□□□□ 0.38
Ccl3P10855 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl3P10855 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl3P10855 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ccl3P10855 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl3P10855 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl3P10855 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccl3P10855 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccl3P10855 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.42■□□□□ 0.38
Ccl3P10855 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl3P10855 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl3P10855 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Ccl3P10855 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl3P10855 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl3P10855 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl3P10855 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl3P10855 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl3P10855 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccl3P10855 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl3P10855 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl3P10855 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.4■□□□□ 0.38
Ccl3P10855 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ccl3P10855 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccl3P10855 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl3P10855 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ccl3P10855 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.4■□□□□ 0.38
Ccl3P10855 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl3P10855 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl3P10855 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccl3P10855 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl3P10855 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl3P10855 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl3P10855 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.4■□□□□ 0.38
Ccl3P10855 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl3P10855 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ccl3P10855 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl3P10855 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl3P10855 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl3P10855 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl3P10855 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl3P10855 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl3P10855 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Ccl3P10855 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccl3P10855 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccl3P10855 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl3P10855 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl3P10855 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl3P10855 Gm7290-201ENSMUST00000104990 617 ntBASIC17.38■□□□□ 0.37
Ccl3P10855 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.38■□□□□ 0.37
Ccl3P10855 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl3P10855 Gm13148-201ENSMUST00000118892 745 ntBASIC17.38■□□□□ 0.37
Ccl3P10855 Gm12918-201ENSMUST00000120234 636 ntBASIC17.38■□□□□ 0.37
Ccl3P10855 Gm15710-201ENSMUST00000121821 636 ntBASIC17.38■□□□□ 0.37
Ccl3P10855 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.38■□□□□ 0.37
Ccl3P10855 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms