Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtcraP0C6B2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtcraP0C6B2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtcraP0C6B2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtcraP0C6B2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PtcraP0C6B2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PtcraP0C6B2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PtcraP0C6B2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PtcraP0C6B2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PtcraP0C6B2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PtcraP0C6B2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PtcraP0C6B2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PtcraP0C6B2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PtcraP0C6B2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PtcraP0C6B2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PtcraP0C6B2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PtcraP0C6B2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.07■□□□□ 0.32
PtcraP0C6B2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PtcraP0C6B2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PtcraP0C6B2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PtcraP0C6B2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Gm27454-201ENSMUST00000185090 204 ntBASIC17.06■□□□□ 0.32
PtcraP0C6B2 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.06■□□□□ 0.32
PtcraP0C6B2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PtcraP0C6B2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PtcraP0C6B2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PtcraP0C6B2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PtcraP0C6B2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PtcraP0C6B2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PtcraP0C6B2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PtcraP0C6B2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PtcraP0C6B2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PtcraP0C6B2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PtcraP0C6B2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.04■□□□□ 0.32
PtcraP0C6B2 Gm12251-201ENSMUST00000117893 792 ntBASIC17.04■□□□□ 0.32
PtcraP0C6B2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.04■□□□□ 0.32
PtcraP0C6B2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PtcraP0C6B2 Mir7075-201ENSMUST00000184187 82 ntBASIC17.04■□□□□ 0.32
PtcraP0C6B2 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.04■□□□□ 0.32
PtcraP0C6B2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PtcraP0C6B2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PtcraP0C6B2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PtcraP0C6B2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PtcraP0C6B2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PtcraP0C6B2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PtcraP0C6B2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PtcraP0C6B2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PtcraP0C6B2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PtcraP0C6B2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PtcraP0C6B2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PtcraP0C6B2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PtcraP0C6B2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PtcraP0C6B2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PtcraP0C6B2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PtcraP0C6B2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PtcraP0C6B2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PtcraP0C6B2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PtcraP0C6B2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PtcraP0C6B2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PtcraP0C6B2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PtcraP0C6B2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PtcraP0C6B2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
PtcraP0C6B2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PtcraP0C6B2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PtcraP0C6B2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PtcraP0C6B2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.01■□□□□ 0.31
PtcraP0C6B2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.01■□□□□ 0.31
PtcraP0C6B2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PtcraP0C6B2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PtcraP0C6B2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PtcraP0C6B2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17■□□□□ 0.31
PtcraP0C6B2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PtcraP0C6B2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PtcraP0C6B2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PtcraP0C6B2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 160.2 ms