Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb2P0C1T1 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.11■□□□□ 0.33
Hoxb2P0C1T1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb2P0C1T1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb2P0C1T1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb2P0C1T1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb2P0C1T1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxb2P0C1T1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hoxb2P0C1T1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxb2P0C1T1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hoxb2P0C1T1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxb2P0C1T1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Hoxb2P0C1T1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxb2P0C1T1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxb2P0C1T1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hoxb2P0C1T1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb2P0C1T1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxb2P0C1T1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.08■□□□□ 0.33
Hoxb2P0C1T1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.08■□□□□ 0.32
Hoxb2P0C1T1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxb2P0C1T1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxb2P0C1T1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxb2P0C1T1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxb2P0C1T1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxb2P0C1T1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxb2P0C1T1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxb2P0C1T1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb2P0C1T1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb2P0C1T1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Gm26571-201ENSMUST00000181399 666 ntBASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb2P0C1T1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb2P0C1T1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.03■□□□□ 0.32
Hoxb2P0C1T1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hoxb2P0C1T1 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms