Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h2P0C090 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h2P0C090 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rc3h2P0C090 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h2P0C090 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h2P0C090 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rc3h2P0C090 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rc3h2P0C090 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20■□□□□ 0.79
Rc3h2P0C090 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rc3h2P0C090 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rc3h2P0C090 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h2P0C090 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.99■□□□□ 0.79
Rc3h2P0C090 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rc3h2P0C090 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h2P0C090 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.98■□□□□ 0.79
Rc3h2P0C090 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h2P0C090 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h2P0C090 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h2P0C090 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h2P0C090 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h2P0C090 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Rc3h2P0C090 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h2P0C090 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rc3h2P0C090 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h2P0C090 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Rc3h2P0C090 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h2P0C090 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rc3h2P0C090 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h2P0C090 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h2P0C090 Gm13234-201ENSMUST00000120010 747 ntBASIC19.96■□□□□ 0.79
Rc3h2P0C090 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.96■□□□□ 0.79
Rc3h2P0C090 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.96■□□□□ 0.79
Rc3h2P0C090 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h2P0C090 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h2P0C090 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h2P0C090 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rc3h2P0C090 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h2P0C090 Reep4-203ENSMUST00000226563 1444 ntBASIC19.95■□□□□ 0.78
Rc3h2P0C090 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rc3h2P0C090 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.95■□□□□ 0.78
Rc3h2P0C090 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.95■□□□□ 0.78
Rc3h2P0C090 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h2P0C090 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h2P0C090 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rc3h2P0C090 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h2P0C090 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.94■□□□□ 0.78
Rc3h2P0C090 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h2P0C090 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h2P0C090 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.94■□□□□ 0.78
Rc3h2P0C090 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rc3h2P0C090 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rc3h2P0C090 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rc3h2P0C090 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.93■□□□□ 0.78
Rc3h2P0C090 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms