Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Hoxc8P09025 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc8P09025 AA386476-201ENSMUST00000098781 1665 ntBASIC21.22■□□□□ 0.99
Hoxc8P09025 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc8P09025 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc8P09025 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc8P09025 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc8P09025 Mir5133-201ENSMUST00000174955 77 ntBASIC21.22■□□□□ 0.99
Hoxc8P09025 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.22■□□□□ 0.99
Hoxc8P09025 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Hoxc8P09025 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc8P09025 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc8P09025 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc8P09025 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.21■□□□□ 0.99
Hoxc8P09025 Gm13534-201ENSMUST00000121169 513 ntBASIC21.21■□□□□ 0.99
Hoxc8P09025 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc8P09025 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc8P09025 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc8P09025 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc8P09025 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc8P09025 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc8P09025 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Hoxc8P09025 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc8P09025 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Hoxc8P09025 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.2■□□□□ 0.98
Hoxc8P09025 Gm12441-201ENSMUST00000121806 588 ntBASIC21.2■□□□□ 0.98
Hoxc8P09025 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.2■□□□□ 0.98
Hoxc8P09025 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Hoxc8P09025 Gm4968-201ENSMUST00000071458 858 ntBASIC21.2■□□□□ 0.98
Hoxc8P09025 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc8P09025 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.2■□□□□ 0.98
Hoxc8P09025 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc8P09025 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc8P09025 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc8P09025 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.19■□□□□ 0.98
Hoxc8P09025 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc8P09025 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.19■□□□□ 0.98
Hoxc8P09025 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc8P09025 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc8P09025 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc8P09025 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.18■□□□□ 0.98
Hoxc8P09025 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc8P09025 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc8P09025 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc8P09025 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.18■□□□□ 0.98
Hoxc8P09025 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc8P09025 Gm13148-201ENSMUST00000118892 745 ntBASIC21.18■□□□□ 0.98
Hoxc8P09025 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.18■□□□□ 0.98
Hoxc8P09025 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc8P09025 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc8P09025 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hoxc8P09025 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc8P09025 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc8P09025 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc8P09025 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc8P09025 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.17■□□□□ 0.98
Hoxc8P09025 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc8P09025 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc8P09025 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.17■□□□□ 0.98
Hoxc8P09025 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.17■□□□□ 0.98
Hoxc8P09025 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc8P09025 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc8P09025 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc8P09025 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc8P09025 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc8P09025 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc8P09025 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Hoxc8P09025 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc8P09025 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.16■□□□□ 0.98
Hoxc8P09025 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc8P09025 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc8P09025 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc8P09025 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc8P09025 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc8P09025 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hoxc8P09025 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
Hoxc8P09025 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc8P09025 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc8P09025 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Hoxc8P09025 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc8P09025 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.15■□□□□ 0.98
Hoxc8P09025 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc8P09025 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc8P09025 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.15■□□□□ 0.98
Hoxc8P09025 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxc8P09025 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxc8P09025 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.14■□□□□ 0.98
Hoxc8P09025 Gm7290-201ENSMUST00000104990 617 ntBASIC21.14■□□□□ 0.97
Hoxc8P09025 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Hoxc8P09025 Gm12918-201ENSMUST00000120234 636 ntBASIC21.14■□□□□ 0.97
Hoxc8P09025 Gm15710-201ENSMUST00000121821 636 ntBASIC21.14■□□□□ 0.97
Hoxc8P09025 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc8P09025 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Hoxc8P09025 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.14■□□□□ 0.97
Hoxc8P09025 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.14■□□□□ 0.97
Hoxc8P09025 Gm5075-201ENSMUST00000196916 622 ntBASIC21.14■□□□□ 0.97
Hoxc8P09025 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.14■□□□□ 0.97
Hoxc8P09025 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.14■□□□□ 0.97
Hoxc8P09025 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.14■□□□□ 0.97
Hoxc8P09025 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms