Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PrnpP04925 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PrnpP04925 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PrnpP04925 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PrnpP04925 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.47■□□□□ 0.87
PrnpP04925 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.47■□□□□ 0.87
PrnpP04925 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PrnpP04925 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.47■□□□□ 0.87
PrnpP04925 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.47■□□□□ 0.87
PrnpP04925 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PrnpP04925 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PrnpP04925 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PrnpP04925 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PrnpP04925 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PrnpP04925 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PrnpP04925 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.46■□□□□ 0.87
PrnpP04925 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PrnpP04925 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PrnpP04925 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PrnpP04925 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PrnpP04925 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PrnpP04925 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PrnpP04925 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PrnpP04925 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PrnpP04925 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PrnpP04925 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PrnpP04925 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PrnpP04925 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PrnpP04925 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
PrnpP04925 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PrnpP04925 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.44■□□□□ 0.86
PrnpP04925 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.44■□□□□ 0.86
PrnpP04925 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PrnpP04925 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PrnpP04925 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PrnpP04925 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PrnpP04925 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PrnpP04925 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.43■□□□□ 0.86
PrnpP04925 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.43■□□□□ 0.86
PrnpP04925 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PrnpP04925 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PrnpP04925 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PrnpP04925 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PrnpP04925 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PrnpP04925 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PrnpP04925 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PrnpP04925 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PrnpP04925 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PrnpP04925 Gm38205-201ENSMUST00000192243 258 ntBASIC20.42■□□□□ 0.86
PrnpP04925 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.42■□□□□ 0.86
PrnpP04925 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.42■□□□□ 0.86
PrnpP04925 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PrnpP04925 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PrnpP04925 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PrnpP04925 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.41■□□□□ 0.86
PrnpP04925 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 Gm4968-201ENSMUST00000071458 858 ntBASIC20.41■□□□□ 0.86
PrnpP04925 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PrnpP04925 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PrnpP04925 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PrnpP04925 Gm7290-201ENSMUST00000104990 617 ntBASIC20.4■□□□□ 0.86
PrnpP04925 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PrnpP04925 Gm12918-201ENSMUST00000120234 636 ntBASIC20.4■□□□□ 0.86
PrnpP04925 Gm15710-201ENSMUST00000121821 636 ntBASIC20.4■□□□□ 0.86
PrnpP04925 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.4■□□□□ 0.86
PrnpP04925 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.4■□□□□ 0.86
PrnpP04925 Gm5075-201ENSMUST00000196916 622 ntBASIC20.4■□□□□ 0.86
PrnpP04925 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.4■□□□□ 0.86
PrnpP04925 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PrnpP04925 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PrnpP04925 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PrnpP04925 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PrnpP04925 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.4■□□□□ 0.86
PrnpP04925 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.4■□□□□ 0.86
PrnpP04925 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.4■□□□□ 0.86
PrnpP04925 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PrnpP04925 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PrnpP04925 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PrnpP04925 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms