Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mtco1P00397 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mtco1P00397 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mtco1P00397 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Mtco1P00397 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Mtco1P00397 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Mtco1P00397 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mtco1P00397 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.56■■□□□ 1.04
Mtco1P00397 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.56■■□□□ 1.04
Mtco1P00397 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Mtco1P00397 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mtco1P00397 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mtco1P00397 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Mtco1P00397 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mtco1P00397 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mtco1P00397 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Mtco1P00397 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mtco1P00397 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.55■■□□□ 1.04
Mtco1P00397 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.55■■□□□ 1.04
Mtco1P00397 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Mtco1P00397 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Mtco1P00397 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mtco1P00397 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mtco1P00397 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Mtco1P00397 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mtco1P00397 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mtco1P00397 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Mtco1P00397 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.54■■□□□ 1.04
Mtco1P00397 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.54■■□□□ 1.04
Mtco1P00397 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.54■■□□□ 1.04
Mtco1P00397 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.54■■□□□ 1.04
Mtco1P00397 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mtco1P00397 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Mtco1P00397 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mtco1P00397 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mtco1P00397 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
Mtco1P00397 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mtco1P00397 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mtco1P00397 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mtco1P00397 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Mtco1P00397 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
Mtco1P00397 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Mtco1P00397 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
Mtco1P00397 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Mtco1P00397 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Mtco1P00397 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.52■■□□□ 1.04
Mtco1P00397 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.52■■□□□ 1.04
Mtco1P00397 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mtco1P00397 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.52■■□□□ 1.04
Mtco1P00397 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Mtco1P00397 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.52■■□□□ 1.04
Mtco1P00397 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Mtco1P00397 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.52■■□□□ 1.04
Mtco1P00397 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mtco1P00397 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mtco1P00397 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Mtco1P00397 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Mtco1P00397 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Mtco1P00397 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mtco1P00397 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mtco1P00397 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Mtco1P00397 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Mtco1P00397 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Mtco1P00397 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Mtco1P00397 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mtco1P00397 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mtco1P00397 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Mtco1P00397 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mtco1P00397 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Mtco1P00397 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.5■■□□□ 1.03
Mtco1P00397 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.5■■□□□ 1.03
Mtco1P00397 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mtco1P00397 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mtco1P00397 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mtco1P00397 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mtco1P00397 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Mtco1P00397 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Mtco1P00397 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mtco1P00397 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mtco1P00397 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mtco1P00397 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Mtco1P00397 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.49■■□□□ 1.03
Mtco1P00397 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Mtco1P00397 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mtco1P00397 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mtco1P00397 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Mtco1P00397 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mtco1P00397 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mtco1P00397 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.48■■□□□ 1.03
Mtco1P00397 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mtco1P00397 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.48■■□□□ 1.03
Mtco1P00397 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mtco1P00397 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mtco1P00397 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mtco1P00397 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mtco1P00397 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mtco1P00397 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.47■■□□□ 1.03
Mtco1P00397 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.47■■□□□ 1.03
Mtco1P00397 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.47■■□□□ 1.03
Mtco1P00397 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms