Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.32■□□□□ 0.84
Syn1O88935 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syn1O88935 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Syn1O88935 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.32■□□□□ 0.84
Syn1O88935 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Syn1O88935 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syn1O88935 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Syn1O88935 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syn1O88935 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syn1O88935 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syn1O88935 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syn1O88935 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syn1O88935 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Syn1O88935 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syn1O88935 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.3■□□□□ 0.84
Syn1O88935 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syn1O88935 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.3■□□□□ 0.84
Syn1O88935 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.3■□□□□ 0.84
Syn1O88935 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syn1O88935 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syn1O88935 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.3■□□□□ 0.84
Syn1O88935 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syn1O88935 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syn1O88935 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.3■□□□□ 0.84
Syn1O88935 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Syn1O88935 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Syn1O88935 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Syn1O88935 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syn1O88935 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syn1O88935 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syn1O88935 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syn1O88935 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syn1O88935 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Syn1O88935 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Syn1O88935 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syn1O88935 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Syn1O88935 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syn1O88935 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Syn1O88935 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syn1O88935 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syn1O88935 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.27■□□□□ 0.84
Syn1O88935 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syn1O88935 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.27■□□□□ 0.84
Syn1O88935 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Syn1O88935 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.27■□□□□ 0.84
Syn1O88935 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syn1O88935 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syn1O88935 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Syn1O88935 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syn1O88935 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.26■□□□□ 0.83
Syn1O88935 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syn1O88935 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.26■□□□□ 0.83
Syn1O88935 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.26■□□□□ 0.83
Syn1O88935 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Syn1O88935 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.26■□□□□ 0.83
Syn1O88935 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.26■□□□□ 0.83
Syn1O88935 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syn1O88935 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syn1O88935 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Syn1O88935 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syn1O88935 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syn1O88935 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.25■□□□□ 0.83
Syn1O88935 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Syn1O88935 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.25■□□□□ 0.83
Syn1O88935 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Syn1O88935 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.25■□□□□ 0.83
Syn1O88935 Gm6420-201ENSMUST00000193885 723 ntBASIC20.25■□□□□ 0.83
Syn1O88935 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syn1O88935 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syn1O88935 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Syn1O88935 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Syn1O88935 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syn1O88935 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syn1O88935 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syn1O88935 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Syn1O88935 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syn1O88935 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syn1O88935 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syn1O88935 Gm6211-202ENSMUST00000167849 925 ntBASIC20.24■□□□□ 0.83
Syn1O88935 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syn1O88935 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syn1O88935 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Syn1O88935 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Syn1O88935 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.23■□□□□ 0.83
Syn1O88935 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Syn1O88935 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Syn1O88935 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Syn1O88935 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Syn1O88935 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Syn1O88935 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.23■□□□□ 0.83
Syn1O88935 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syn1O88935 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Syn1O88935 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Syn1O88935 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syn1O88935 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syn1O88935 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syn1O88935 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.22■□□□□ 0.83
Syn1O88935 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syn1O88935 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Syn1O88935 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms