Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh2d1aO88890 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh2d1aO88890 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh2d1aO88890 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sh2d1aO88890 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh2d1aO88890 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh2d1aO88890 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.84□□□□□ -0.19
Sh2d1aO88890 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh2d1aO88890 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh2d1aO88890 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sh2d1aO88890 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sh2d1aO88890 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sh2d1aO88890 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.83□□□□□ -0.19
Sh2d1aO88890 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sh2d1aO88890 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh2d1aO88890 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh2d1aO88890 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh2d1aO88890 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh2d1aO88890 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh2d1aO88890 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.83□□□□□ -0.2
Sh2d1aO88890 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.83□□□□□ -0.2
Sh2d1aO88890 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sh2d1aO88890 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh2d1aO88890 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh2d1aO88890 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sh2d1aO88890 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.82□□□□□ -0.2
Sh2d1aO88890 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.82□□□□□ -0.2
Sh2d1aO88890 Gm43530-201ENSMUST00000195920 274 ntBASIC13.82□□□□□ -0.2
Sh2d1aO88890 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh2d1aO88890 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sh2d1aO88890 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh2d1aO88890 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.8□□□□□ -0.2
Sh2d1aO88890 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Sh2d1aO88890 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sh2d1aO88890 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh2d1aO88890 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh2d1aO88890 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms