Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.31■□□□□ 0.36
CcnkO88874 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CcnkO88874 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CcnkO88874 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
CcnkO88874 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
CcnkO88874 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnkO88874 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CcnkO88874 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnkO88874 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnkO88874 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnkO88874 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CcnkO88874 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CcnkO88874 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CcnkO88874 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.3■□□□□ 0.36
CcnkO88874 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CcnkO88874 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CcnkO88874 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnkO88874 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnkO88874 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnkO88874 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnkO88874 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.3■□□□□ 0.36
CcnkO88874 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CcnkO88874 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnkO88874 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CcnkO88874 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnkO88874 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CcnkO88874 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.29■□□□□ 0.36
CcnkO88874 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnkO88874 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CcnkO88874 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CcnkO88874 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.29■□□□□ 0.36
CcnkO88874 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnkO88874 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnkO88874 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnkO88874 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnkO88874 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.28■□□□□ 0.36
CcnkO88874 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.28■□□□□ 0.36
CcnkO88874 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CcnkO88874 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnkO88874 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CcnkO88874 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CcnkO88874 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CcnkO88874 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CcnkO88874 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CcnkO88874 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CcnkO88874 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.27■□□□□ 0.36
CcnkO88874 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CcnkO88874 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CcnkO88874 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CcnkO88874 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.27■□□□□ 0.35
CcnkO88874 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CcnkO88874 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CcnkO88874 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CcnkO88874 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CcnkO88874 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CcnkO88874 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CcnkO88874 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.26■□□□□ 0.35
CcnkO88874 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CcnkO88874 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.26■□□□□ 0.35
CcnkO88874 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CcnkO88874 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CcnkO88874 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CcnkO88874 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CcnkO88874 Rarb-207ENSMUST00000225921 2756 ntBASIC17.25■□□□□ 0.35
CcnkO88874 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CcnkO88874 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CcnkO88874 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms