Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Best1O88870 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Best1O88870 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Best1O88870 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Best1O88870 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.98■□□□□ 0.63
Best1O88870 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Best1O88870 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Best1O88870 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Best1O88870 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Best1O88870 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Best1O88870 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Best1O88870 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Best1O88870 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Best1O88870 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Best1O88870 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.97■□□□□ 0.63
Best1O88870 Gm42778-201ENSMUST00000199644 553 ntBASIC18.97■□□□□ 0.63
Best1O88870 Gm10033-202ENSMUST00000211874 928 ntBASIC18.97■□□□□ 0.63
Best1O88870 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.97■□□□□ 0.63
Best1O88870 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Best1O88870 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Best1O88870 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Best1O88870 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Best1O88870 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.96■□□□□ 0.63
Best1O88870 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Best1O88870 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.96■□□□□ 0.63
Best1O88870 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Best1O88870 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Best1O88870 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Best1O88870 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Best1O88870 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Best1O88870 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Best1O88870 Gm18671-201ENSMUST00000214826 683 ntBASIC18.95■□□□□ 0.62
Best1O88870 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Best1O88870 Gm9988-201ENSMUST00000069786 435 ntBASIC18.95■□□□□ 0.62
Best1O88870 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Best1O88870 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Best1O88870 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Best1O88870 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Best1O88870 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Best1O88870 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Best1O88870 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.94■□□□□ 0.62
Best1O88870 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Best1O88870 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Best1O88870 Gm26571-201ENSMUST00000181399 666 ntBASIC18.94■□□□□ 0.62
Best1O88870 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.94■□□□□ 0.62
Best1O88870 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Best1O88870 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Best1O88870 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Best1O88870 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Best1O88870 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Best1O88870 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Best1O88870 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Best1O88870 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Best1O88870 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Best1O88870 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Best1O88870 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.93■□□□□ 0.62
Best1O88870 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.93■□□□□ 0.62
Best1O88870 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Best1O88870 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Best1O88870 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Best1O88870 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Best1O88870 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Best1O88870 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Best1O88870 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.93■□□□□ 0.62
Best1O88870 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Best1O88870 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Best1O88870 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Best1O88870 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.92■□□□□ 0.62
Best1O88870 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.92■□□□□ 0.62
Best1O88870 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Best1O88870 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Best1O88870 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Best1O88870 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Best1O88870 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Best1O88870 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Best1O88870 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Best1O88870 Gm13234-201ENSMUST00000120010 747 ntBASIC18.91■□□□□ 0.62
Best1O88870 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.91■□□□□ 0.62
Best1O88870 Gm27405-201ENSMUST00000184201 112 ntBASIC18.91■□□□□ 0.62
Best1O88870 Gm42569-201ENSMUST00000200539 472 ntBASIC18.91■□□□□ 0.62
Best1O88870 AV356131-201ENSMUST00000206201 750 ntBASIC18.91■□□□□ 0.62
Best1O88870 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Best1O88870 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Best1O88870 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Best1O88870 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Best1O88870 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Best1O88870 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Best1O88870 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Best1O88870 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Best1O88870 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Best1O88870 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Best1O88870 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Best1O88870 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Best1O88870 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Best1O88870 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Best1O88870 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Best1O88870 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.89■□□□□ 0.62
Best1O88870 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Best1O88870 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.89■□□□□ 0.61
Best1O88870 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms