Protein–RNA interactions for Protein: O88809

Dcx, Neuronal migration protein doublecortin, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DcxO88809 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DcxO88809 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.41■■□□□ 1.02
DcxO88809 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
DcxO88809 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
DcxO88809 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.41■■□□□ 1.02
DcxO88809 Trmt13-210ENSMUST00000198454 880 ntBASIC21.41■■□□□ 1.02
DcxO88809 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.41■■□□□ 1.02
DcxO88809 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DcxO88809 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DcxO88809 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DcxO88809 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DcxO88809 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.4■■□□□ 1.02
DcxO88809 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.4■■□□□ 1.02
DcxO88809 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DcxO88809 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DcxO88809 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DcxO88809 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DcxO88809 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
DcxO88809 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DcxO88809 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DcxO88809 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.39■■□□□ 1.01
DcxO88809 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.39■■□□□ 1.01
DcxO88809 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DcxO88809 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DcxO88809 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DcxO88809 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DcxO88809 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DcxO88809 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DcxO88809 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DcxO88809 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DcxO88809 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.38■■□□□ 1.01
DcxO88809 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
DcxO88809 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DcxO88809 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DcxO88809 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.38■■□□□ 1.01
DcxO88809 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DcxO88809 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DcxO88809 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
DcxO88809 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DcxO88809 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
DcxO88809 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.37■■□□□ 1.01
DcxO88809 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
DcxO88809 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.37■■□□□ 1.01
DcxO88809 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DcxO88809 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DcxO88809 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.36■■□□□ 1.01
DcxO88809 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DcxO88809 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DcxO88809 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
DcxO88809 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.36■■□□□ 1.01
DcxO88809 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.36■■□□□ 1.01
DcxO88809 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.36■■□□□ 1.01
DcxO88809 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
DcxO88809 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
DcxO88809 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DcxO88809 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DcxO88809 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
DcxO88809 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
DcxO88809 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.35■■□□□ 1.01
DcxO88809 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DcxO88809 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DcxO88809 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
DcxO88809 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DcxO88809 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
DcxO88809 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
DcxO88809 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DcxO88809 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DcxO88809 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DcxO88809 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DcxO88809 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DcxO88809 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DcxO88809 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DcxO88809 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.33■■□□□ 1.01
DcxO88809 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.33■■□□□ 1.01
DcxO88809 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.33■■□□□ 1.01
DcxO88809 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
DcxO88809 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DcxO88809 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DcxO88809 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DcxO88809 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DcxO88809 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DcxO88809 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
DcxO88809 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DcxO88809 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.32■■□□□ 1
DcxO88809 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DcxO88809 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
DcxO88809 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.32■■□□□ 1
DcxO88809 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DcxO88809 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
DcxO88809 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.32■■□□□ 1
DcxO88809 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.31■■□□□ 1
DcxO88809 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
DcxO88809 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.31■■□□□ 1
DcxO88809 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.31■■□□□ 1
DcxO88809 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DcxO88809 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.31■■□□□ 1
DcxO88809 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.31■■□□□ 1
DcxO88809 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.31■■□□□ 1
DcxO88809 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
DcxO88809 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms