Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdha4O88689 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdha4O88689 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdha4O88689 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.03■■□□□ 1.12
Pcdha4O88689 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.03■■□□□ 1.12
Pcdha4O88689 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdha4O88689 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.03■■□□□ 1.12
Pcdha4O88689 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Pcdha4O88689 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdha4O88689 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Pcdha4O88689 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.02■■□□□ 1.12
Pcdha4O88689 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdha4O88689 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Pcdha4O88689 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdha4O88689 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdha4O88689 AA386476-201ENSMUST00000098781 1665 ntBASIC22.02■■□□□ 1.12
Pcdha4O88689 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.02■■□□□ 1.12
Pcdha4O88689 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.02■■□□□ 1.12
Pcdha4O88689 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdha4O88689 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Pcdha4O88689 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdha4O88689 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdha4O88689 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdha4O88689 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdha4O88689 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Pcdha4O88689 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha4O88689 Gm11421-201ENSMUST00000122124 294 ntBASIC22.01■■□□□ 1.11
Pcdha4O88689 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha4O88689 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha4O88689 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha4O88689 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha4O88689 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha4O88689 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha4O88689 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha4O88689 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdha4O88689 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdha4O88689 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdha4O88689 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdha4O88689 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdha4O88689 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdha4O88689 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
Pcdha4O88689 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdha4O88689 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdha4O88689 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdha4O88689 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.99■■□□□ 1.11
Pcdha4O88689 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Pcdha4O88689 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.99■■□□□ 1.11
Pcdha4O88689 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Pcdha4O88689 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Pcdha4O88689 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdha4O88689 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdha4O88689 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
Pcdha4O88689 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha4O88689 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha4O88689 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha4O88689 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha4O88689 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdha4O88689 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha4O88689 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.98■■□□□ 1.11
Pcdha4O88689 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdha4O88689 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.98■■□□□ 1.11
Pcdha4O88689 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha4O88689 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Pcdha4O88689 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdha4O88689 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdha4O88689 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcdha4O88689 Gm40848-201ENSMUST00000221998 324 ntBASIC21.97■■□□□ 1.11
Pcdha4O88689 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Pcdha4O88689 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdha4O88689 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdha4O88689 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha4O88689 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha4O88689 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha4O88689 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Pcdha4O88689 Gm43060-201ENSMUST00000200621 289 ntBASIC21.96■■□□□ 1.11
Pcdha4O88689 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha4O88689 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.96■■□□□ 1.11
Pcdha4O88689 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha4O88689 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha4O88689 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha4O88689 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdha4O88689 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Pcdha4O88689 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.95■■□□□ 1.1
Pcdha4O88689 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.95■■□□□ 1.1
Pcdha4O88689 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdha4O88689 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdha4O88689 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdha4O88689 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha4O88689 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Pcdha4O88689 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms