Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Cacna1hO88427 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1hO88427 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.41■□□□□ 0.7
Cacna1hO88427 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1hO88427 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1hO88427 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1hO88427 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1hO88427 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1hO88427 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1hO88427 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1hO88427 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1hO88427 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cacna1hO88427 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1hO88427 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.4■□□□□ 0.7
Cacna1hO88427 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1hO88427 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1hO88427 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1hO88427 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cacna1hO88427 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1hO88427 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1hO88427 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1hO88427 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1hO88427 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1hO88427 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1hO88427 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1hO88427 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1hO88427 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1hO88427 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1hO88427 Mir1199-201ENSMUST00000117015 119 ntBASIC19.38■□□□□ 0.69
Cacna1hO88427 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1hO88427 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1hO88427 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1hO88427 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Cacna1hO88427 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cacna1hO88427 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1hO88427 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1hO88427 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1hO88427 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1hO88427 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.37■□□□□ 0.69
Cacna1hO88427 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1hO88427 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1hO88427 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1hO88427 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1hO88427 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1hO88427 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cacna1hO88427 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1hO88427 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.36■□□□□ 0.69
Cacna1hO88427 Gm43799-201ENSMUST00000201845 579 ntBASIC19.36■□□□□ 0.69
Cacna1hO88427 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1hO88427 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1hO88427 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cacna1hO88427 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Cacna1hO88427 Gm12896-201ENSMUST00000118430 226 ntBASIC19.36■□□□□ 0.69
Cacna1hO88427 Gm38205-201ENSMUST00000192243 258 ntBASIC19.36■□□□□ 0.69
Cacna1hO88427 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.36■□□□□ 0.69
Cacna1hO88427 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1hO88427 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1hO88427 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1hO88427 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.35■□□□□ 0.69
Cacna1hO88427 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1hO88427 Mir5122-201ENSMUST00000175004 89 ntBASIC19.35■□□□□ 0.69
Cacna1hO88427 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1hO88427 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1hO88427 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1hO88427 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.35■□□□□ 0.69
Cacna1hO88427 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.35■□□□□ 0.69
Cacna1hO88427 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1hO88427 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1hO88427 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1hO88427 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1hO88427 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1hO88427 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cacna1hO88427 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.34■□□□□ 0.69
Cacna1hO88427 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Cacna1hO88427 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cacna1hO88427 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1hO88427 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1hO88427 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1hO88427 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1hO88427 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1hO88427 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1hO88427 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1hO88427 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cacna1hO88427 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1hO88427 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacna1hO88427 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacna1hO88427 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1hO88427 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1hO88427 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cacna1hO88427 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1hO88427 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cacna1hO88427 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cacna1hO88427 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1hO88427 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cacna1hO88427 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1hO88427 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1hO88427 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1hO88427 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1hO88427 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1hO88427 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms