Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.65■□□□□ 0.58
Vti1bO88384 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.65■□□□□ 0.58
Vti1bO88384 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1bO88384 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1bO88384 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Vti1bO88384 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.64■□□□□ 0.58
Vti1bO88384 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.64■□□□□ 0.57
Vti1bO88384 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Vti1bO88384 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1bO88384 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1bO88384 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1bO88384 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1bO88384 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.64■□□□□ 0.57
Vti1bO88384 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1bO88384 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1bO88384 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1bO88384 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1bO88384 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1bO88384 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1bO88384 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1bO88384 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1bO88384 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1bO88384 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1bO88384 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1bO88384 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vti1bO88384 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vti1bO88384 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1bO88384 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1bO88384 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1bO88384 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1bO88384 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1bO88384 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1bO88384 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1bO88384 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vti1bO88384 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vti1bO88384 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.61■□□□□ 0.57
Vti1bO88384 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.61■□□□□ 0.57
Vti1bO88384 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.61■□□□□ 0.57
Vti1bO88384 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.61■□□□□ 0.57
Vti1bO88384 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vti1bO88384 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vti1bO88384 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vti1bO88384 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vti1bO88384 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
Vti1bO88384 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vti1bO88384 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vti1bO88384 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.6■□□□□ 0.57
Vti1bO88384 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vti1bO88384 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.6■□□□□ 0.57
Vti1bO88384 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vti1bO88384 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vti1bO88384 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.6■□□□□ 0.57
Vti1bO88384 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.59■□□□□ 0.57
Vti1bO88384 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vti1bO88384 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vti1bO88384 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Vti1bO88384 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vti1bO88384 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vti1bO88384 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vti1bO88384 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Vti1bO88384 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vti1bO88384 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vti1bO88384 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Vti1bO88384 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.58■□□□□ 0.56
Vti1bO88384 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vti1bO88384 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vti1bO88384 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vti1bO88384 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vti1bO88384 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.58■□□□□ 0.56
Vti1bO88384 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vti1bO88384 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vti1bO88384 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vti1bO88384 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vti1bO88384 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.57■□□□□ 0.56
Vti1bO88384 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vti1bO88384 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vti1bO88384 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vti1bO88384 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.57■□□□□ 0.56
Vti1bO88384 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vti1bO88384 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vti1bO88384 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vti1bO88384 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Vti1bO88384 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vti1bO88384 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vti1bO88384 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vti1bO88384 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.56■□□□□ 0.56
Vti1bO88384 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Vti1bO88384 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vti1bO88384 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Vti1bO88384 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms