Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.76■□□□□ 0.43
Pdlim3O70209 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Pdlim3O70209 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim3O70209 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pdlim3O70209 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pdlim3O70209 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pdlim3O70209 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.75■□□□□ 0.43
Pdlim3O70209 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.75■□□□□ 0.43
Pdlim3O70209 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim3O70209 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim3O70209 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim3O70209 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pdlim3O70209 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim3O70209 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.74■□□□□ 0.43
Pdlim3O70209 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim3O70209 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim3O70209 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pdlim3O70209 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim3O70209 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.73■□□□□ 0.43
Pdlim3O70209 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.73■□□□□ 0.43
Pdlim3O70209 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim3O70209 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Pdlim3O70209 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Pdlim3O70209 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pdlim3O70209 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim3O70209 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim3O70209 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim3O70209 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pdlim3O70209 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pdlim3O70209 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.72■□□□□ 0.43
Pdlim3O70209 Gm40881-201ENSMUST00000223397 166 ntBASIC17.72■□□□□ 0.43
Pdlim3O70209 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim3O70209 Golph3-205ENSMUST00000228671 2842 ntBASIC17.72■□□□□ 0.43
Pdlim3O70209 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim3O70209 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim3O70209 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.71■□□□□ 0.43
Pdlim3O70209 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.71■□□□□ 0.43
Pdlim3O70209 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim3O70209 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim3O70209 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim3O70209 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim3O70209 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim3O70209 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim3O70209 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pdlim3O70209 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim3O70209 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim3O70209 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim3O70209 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pdlim3O70209 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.71■□□□□ 0.43
Pdlim3O70209 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pdlim3O70209 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pdlim3O70209 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pdlim3O70209 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Pdlim3O70209 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim3O70209 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim3O70209 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim3O70209 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim3O70209 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim3O70209 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim3O70209 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim3O70209 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pdlim3O70209 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim3O70209 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.69■□□□□ 0.42
Pdlim3O70209 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim3O70209 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim3O70209 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.69■□□□□ 0.42
Pdlim3O70209 Gm43530-201ENSMUST00000195920 274 ntBASIC17.69■□□□□ 0.42
Pdlim3O70209 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim3O70209 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim3O70209 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim3O70209 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim3O70209 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim3O70209 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdlim3O70209 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pdlim3O70209 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pdlim3O70209 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms