Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.76■□□□□ 0.91
Pja1O55176 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pja1O55176 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pja1O55176 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pja1O55176 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pja1O55176 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Pja1O55176 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pja1O55176 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pja1O55176 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pja1O55176 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pja1O55176 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pja1O55176 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pja1O55176 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Pja1O55176 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pja1O55176 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.74■□□□□ 0.91
Pja1O55176 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.74■□□□□ 0.91
Pja1O55176 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pja1O55176 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pja1O55176 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pja1O55176 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pja1O55176 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pja1O55176 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
Pja1O55176 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pja1O55176 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pja1O55176 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Pja1O55176 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Pja1O55176 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pja1O55176 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pja1O55176 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.73■□□□□ 0.91
Pja1O55176 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pja1O55176 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pja1O55176 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pja1O55176 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pja1O55176 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pja1O55176 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pja1O55176 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pja1O55176 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pja1O55176 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pja1O55176 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pja1O55176 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pja1O55176 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pja1O55176 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.71■□□□□ 0.91
Pja1O55176 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pja1O55176 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pja1O55176 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pja1O55176 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
Pja1O55176 Etf1-202ENSMUST00000180351 108 ntBASIC20.71■□□□□ 0.91
Pja1O55176 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pja1O55176 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pja1O55176 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Pja1O55176 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pja1O55176 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.71■□□□□ 0.91
Pja1O55176 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pja1O55176 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pja1O55176 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pja1O55176 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pja1O55176 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.7■□□□□ 0.9
Pja1O55176 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.7■□□□□ 0.9
Pja1O55176 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pja1O55176 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pja1O55176 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pja1O55176 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pja1O55176 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pja1O55176 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pja1O55176 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pja1O55176 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pja1O55176 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pja1O55176 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pja1O55176 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pja1O55176 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pja1O55176 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pja1O55176 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pja1O55176 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pja1O55176 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pja1O55176 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pja1O55176 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pja1O55176 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pja1O55176 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pja1O55176 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pja1O55176 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pja1O55176 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pja1O55176 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.68■□□□□ 0.9
Pja1O55176 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pja1O55176 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pja1O55176 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pja1O55176 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.67■□□□□ 0.9
Pja1O55176 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pja1O55176 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pja1O55176 Gm15820-201ENSMUST00000201566 728 ntBASIC20.67■□□□□ 0.9
Pja1O55176 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pja1O55176 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pja1O55176 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pja1O55176 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pja1O55176 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pja1O55176 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pja1O55176 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pja1O55176 Gm7417-201ENSMUST00000192950 473 ntBASIC20.66■□□□□ 0.9
Pja1O55176 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.66■□□□□ 0.9
Pja1O55176 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pja1O55176 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms