Protein–RNA interactions for Protein: O55111

Dsg2, Desmoglein-2, mousemouse

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg2O55111 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Dsg2O55111 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Dsg2O55111 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dsg2O55111 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dsg2O55111 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dsg2O55111 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dsg2O55111 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.45■□□□□ 0.7
Dsg2O55111 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.45■□□□□ 0.7
Dsg2O55111 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dsg2O55111 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dsg2O55111 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.45■□□□□ 0.7
Dsg2O55111 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Dsg2O55111 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dsg2O55111 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.44■□□□□ 0.7
Dsg2O55111 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dsg2O55111 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dsg2O55111 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.44■□□□□ 0.7
Dsg2O55111 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dsg2O55111 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
Dsg2O55111 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.44■□□□□ 0.7
Dsg2O55111 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Dsg2O55111 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dsg2O55111 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dsg2O55111 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dsg2O55111 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Dsg2O55111 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dsg2O55111 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Dsg2O55111 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Dsg2O55111 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg2O55111 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg2O55111 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg2O55111 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg2O55111 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg2O55111 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Dsg2O55111 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg2O55111 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.42■□□□□ 0.7
Dsg2O55111 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Dsg2O55111 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg2O55111 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Dsg2O55111 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg2O55111 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg2O55111 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Dsg2O55111 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg2O55111 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg2O55111 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg2O55111 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.41■□□□□ 0.7
Dsg2O55111 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg2O55111 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg2O55111 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg2O55111 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg2O55111 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg2O55111 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Dsg2O55111 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dsg2O55111 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.4■□□□□ 0.7
Dsg2O55111 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Dsg2O55111 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Dsg2O55111 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.4■□□□□ 0.7
Dsg2O55111 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.4■□□□□ 0.7
Dsg2O55111 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.4■□□□□ 0.7
Dsg2O55111 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Dsg2O55111 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Dsg2O55111 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
Dsg2O55111 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg2O55111 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg2O55111 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg2O55111 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.39■□□□□ 0.69
Dsg2O55111 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.39■□□□□ 0.69
Dsg2O55111 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg2O55111 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Dsg2O55111 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg2O55111 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg2O55111 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Dsg2O55111 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.39■□□□□ 0.69
Dsg2O55111 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.38■□□□□ 0.69
Dsg2O55111 Gm12933-201ENSMUST00000120203 872 ntBASIC19.38■□□□□ 0.69
Dsg2O55111 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg2O55111 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg2O55111 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg2O55111 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.38■□□□□ 0.69
Dsg2O55111 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg2O55111 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg2O55111 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg2O55111 Gm10602-201ENSMUST00000098239 609 ntBASIC19.38■□□□□ 0.69
Dsg2O55111 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Dsg2O55111 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg2O55111 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg2O55111 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg2O55111 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg2O55111 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.37■□□□□ 0.69
Dsg2O55111 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg2O55111 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg2O55111 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.37■□□□□ 0.69
Dsg2O55111 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.37■□□□□ 0.69
Dsg2O55111 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg2O55111 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Dsg2O55111 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Dsg2O55111 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Dsg2O55111 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Dsg2O55111 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Dsg2O55111 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms