Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Rnf13O54965 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf13O54965 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf13O54965 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf13O54965 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.76■□□□□ 0.43
Rnf13O54965 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf13O54965 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Rnf13O54965 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf13O54965 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf13O54965 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf13O54965 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf13O54965 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.75■□□□□ 0.43
Rnf13O54965 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rnf13O54965 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf13O54965 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf13O54965 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf13O54965 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf13O54965 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.74■□□□□ 0.43
Rnf13O54965 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf13O54965 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf13O54965 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf13O54965 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rnf13O54965 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rnf13O54965 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.74■□□□□ 0.43
Rnf13O54965 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf13O54965 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf13O54965 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf13O54965 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf13O54965 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf13O54965 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.74■□□□□ 0.43
Rnf13O54965 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf13O54965 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rnf13O54965 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf13O54965 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf13O54965 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf13O54965 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf13O54965 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf13O54965 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf13O54965 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf13O54965 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf13O54965 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf13O54965 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Rnf13O54965 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf13O54965 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf13O54965 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.72■□□□□ 0.43
Rnf13O54965 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.72■□□□□ 0.43
Rnf13O54965 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf13O54965 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.72■□□□□ 0.43
Rnf13O54965 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.72■□□□□ 0.43
Rnf13O54965 Mir6236-201ENSMUST00000184437 123 ntBASIC17.72■□□□□ 0.43
Rnf13O54965 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf13O54965 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf13O54965 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf13O54965 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf13O54965 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf13O54965 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf13O54965 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf13O54965 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf13O54965 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf13O54965 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf13O54965 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf13O54965 Gm40881-201ENSMUST00000223397 166 ntBASIC17.71■□□□□ 0.43
Rnf13O54965 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rnf13O54965 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf13O54965 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf13O54965 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf13O54965 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.7■□□□□ 0.42
Rnf13O54965 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rnf13O54965 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf13O54965 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf13O54965 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf13O54965 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf13O54965 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf13O54965 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf13O54965 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf13O54965 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Rnf13O54965 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf13O54965 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf13O54965 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf13O54965 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf13O54965 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf13O54965 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.68■□□□□ 0.42
Rnf13O54965 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf13O54965 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf13O54965 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rnf13O54965 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf13O54965 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf13O54965 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf13O54965 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf13O54965 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms