Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc1O35704 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc1O35704 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc1O35704 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc1O35704 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc1O35704 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc1O35704 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc1O35704 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc1O35704 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc1O35704 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc1O35704 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc1O35704 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc1O35704 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc1O35704 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc1O35704 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc1O35704 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc1O35704 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc1O35704 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc1O35704 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Sptlc1O35704 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc1O35704 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc1O35704 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc1O35704 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc1O35704 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Sptlc1O35704 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc1O35704 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Sptlc1O35704 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc1O35704 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Sptlc1O35704 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.51■■□□□ 1.03
Sptlc1O35704 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc1O35704 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc1O35704 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc1O35704 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc1O35704 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Sptlc1O35704 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Sptlc1O35704 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc1O35704 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Sptlc1O35704 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc1O35704 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc1O35704 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc1O35704 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc1O35704 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.5■■□□□ 1.03
Sptlc1O35704 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc1O35704 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc1O35704 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc1O35704 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc1O35704 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sptlc1O35704 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.49■■□□□ 1.03
Sptlc1O35704 Gm27011-201ENSMUST00000182352 972 ntBASIC21.49■■□□□ 1.03
Sptlc1O35704 Gm37444-201ENSMUST00000193605 439 ntBASIC21.49■■□□□ 1.03
Sptlc1O35704 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.49■■□□□ 1.03
Sptlc1O35704 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sptlc1O35704 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.49■■□□□ 1.03
Sptlc1O35704 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sptlc1O35704 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sptlc1O35704 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sptlc1O35704 Gm12933-201ENSMUST00000120203 872 ntBASIC21.48■■□□□ 1.03
Sptlc1O35704 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sptlc1O35704 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Sptlc1O35704 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sptlc1O35704 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.47■■□□□ 1.03
Sptlc1O35704 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.47■■□□□ 1.03
Sptlc1O35704 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.47■■□□□ 1.03
Sptlc1O35704 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Sptlc1O35704 Gm10602-201ENSMUST00000098239 609 ntBASIC21.47■■□□□ 1.03
Sptlc1O35704 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.47■■□□□ 1.03
Sptlc1O35704 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Sptlc1O35704 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sptlc1O35704 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.46■■□□□ 1.03
Sptlc1O35704 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Sptlc1O35704 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sptlc1O35704 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sptlc1O35704 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Sptlc1O35704 Gm7514-201ENSMUST00000209475 934 ntBASIC21.46■■□□□ 1.03
Sptlc1O35704 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sptlc1O35704 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sptlc1O35704 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
Sptlc1O35704 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sptlc1O35704 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.45■■□□□ 1.03
Sptlc1O35704 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sptlc1O35704 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sptlc1O35704 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sptlc1O35704 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sptlc1O35704 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.45■■□□□ 1.02
Sptlc1O35704 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sptlc1O35704 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sptlc1O35704 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Sptlc1O35704 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sptlc1O35704 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sptlc1O35704 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.45■■□□□ 1.02
Sptlc1O35704 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Sptlc1O35704 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sptlc1O35704 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.44■■□□□ 1.02
Sptlc1O35704 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sptlc1O35704 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sptlc1O35704 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sptlc1O35704 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sptlc1O35704 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sptlc1O35704 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Sptlc1O35704 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms