Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Matn3O35701 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Matn3O35701 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Matn3O35701 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Matn3O35701 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Matn3O35701 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Matn3O35701 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Matn3O35701 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.77■□□□□ 0.44
Matn3O35701 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Matn3O35701 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Matn3O35701 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Matn3O35701 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Matn3O35701 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.77■□□□□ 0.44
Matn3O35701 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.77■□□□□ 0.44
Matn3O35701 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Matn3O35701 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Matn3O35701 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.77■□□□□ 0.44
Matn3O35701 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Matn3O35701 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Matn3O35701 Grk6-206ENSMUST00000224995 2971 ntBASIC17.77■□□□□ 0.44
Matn3O35701 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Matn3O35701 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Matn3O35701 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Matn3O35701 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Matn3O35701 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Matn3O35701 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Matn3O35701 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Matn3O35701 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.76■□□□□ 0.43
Matn3O35701 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Matn3O35701 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Matn3O35701 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.76■□□□□ 0.43
Matn3O35701 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Matn3O35701 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.76■□□□□ 0.43
Matn3O35701 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Matn3O35701 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Matn3O35701 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Matn3O35701 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.75■□□□□ 0.43
Matn3O35701 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.75■□□□□ 0.43
Matn3O35701 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.75■□□□□ 0.43
Matn3O35701 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.75■□□□□ 0.43
Matn3O35701 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Gm5921-201ENSMUST00000075898 882 ntBASIC17.75■□□□□ 0.43
Matn3O35701 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Matn3O35701 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Matn3O35701 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Matn3O35701 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Matn3O35701 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Matn3O35701 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Matn3O35701 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Matn3O35701 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Matn3O35701 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.74■□□□□ 0.43
Matn3O35701 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Matn3O35701 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Matn3O35701 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Matn3O35701 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Matn3O35701 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Matn3O35701 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.73■□□□□ 0.43
Matn3O35701 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Matn3O35701 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Matn3O35701 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Matn3O35701 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.73■□□□□ 0.43
Matn3O35701 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Matn3O35701 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Matn3O35701 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Matn3O35701 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Matn3O35701 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Matn3O35701 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Matn3O35701 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Matn3O35701 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.73■□□□□ 0.43
Matn3O35701 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Matn3O35701 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Matn3O35701 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Matn3O35701 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms